Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq339 717 0.0
>seq339
Length=19946
Score = 717 bits (794), Expect = 0.0
Identities = 564/666 (85%), Gaps = 12/666 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| |||||||| |||||||||||||||||||||||||||||| |||| |||||||
Sbjct 4234 TGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 4293
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 4294 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 4353
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 4354 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 4413
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGG- 261
| | |||||||| | | || | | |||| |||| |||| | |
Sbjct 4414 GAGATCAGACTTG---GTATTTTGTATGTTACTTCTTCGGG-GGTGGCCTCTACAGTTTA 4469
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CTTCGG 320
|| |||||||||||| | ||||||| ||| || || || |||||||| | ||||||
Sbjct 4470 TCGGGCCAGCATCAGTTTGGGCGGTAGGAGAATTGCGTTGG-AATGTGGCACGGCTTCGG 4528
Query 321 GGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGG-- 377
| ||||||||||| | | || | ||| |||| |||||||| | ||| |
Sbjct 4529 TTGTGTGTTATAGCCTTCGTCG--ATACTGCCAGCCTAGACTGAGGACTGCGGTTTATAC 4586
Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437
|||||||| |||| ||||| | |||| |||||||||| ||||||||||||||||||||
Sbjct 4587 CTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTCTA 4646
Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497
|| ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||
Sbjct 4647 ACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGG 4706
Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4707 GGGCCCGTATGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 4766
Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4767 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 4826
Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677
||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct 4827 ACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAG 4886
Query 678 GGGCGA 683
||||||
Sbjct 4887 GGGCGA 4892
Score = 691 bits (766), Expect = 0.0
Identities = 564/670 (84%), Gaps = 16/670 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| |||||||| |||||||||||||||||||||||||||||| |||| |||||||
Sbjct 14912 TGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 14971
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 14972 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 15031
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 15032 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 15091
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGG- 261
| | |||||||| | | || | | |||| |||| |||| | |
Sbjct 15092 GAGATCAGACTTG---GTATTTTGTATGTTACTTCTTCGGG-GGTGGCCTCTACAGTTTA 15147
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CTTCGG 320
|| |||||||||||| | ||||||| ||| || || || |||||||| | ||||||
Sbjct 15148 TCGGGCCAGCATCAGTTTGGGCGGTAGGAGAATTGCGTTGG-AATGTGGCACGGCTTCGG 15206
Query 321 GGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGG-- 377
| ||||||||||| | | || | ||| |||| |||||||| | ||| |
Sbjct 15207 TTGTGTGTTATAGCCTTCGTCG--ATACTGCCAGCCTAGACTGAGGACTGCGGTTTATAC 15264
Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437
|||||||| |||| ||||| | |||| |||||||||| ||||||||||||||||||||
Sbjct 15265 CTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTCTA 15324
Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAA-CCCGTGCGCGTAATGAAA-GTGAACGGAGGT 495
|| ||||||||||||||||||||| ||| ||||| |||||||||||| ||||||| ||||
Sbjct 15325 ACGTCTATGCGAGTGTTTGGGTGTAAAAACCCGTACGCGTAATGAAAAGTGAACGTAGGT 15384
Query 496 GGGAA-CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 554
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 15385 GGGGGGCCCGTATGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 15444
Query 555 GAGCATAGCTGTTGGGACCCGAAA-GATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 15445 GAGCATAGCTGTTGGGACCCGAAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 15504
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||
Sbjct 15505 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGT 15564
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 15565 ATAGGGGCGA 15574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079992127850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |