Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq339 717 0.0 >seq339 Length=19946 Score = 717 bits (794), Expect = 0.0 Identities = 564/666 (85%), Gaps = 12/666 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 4234 TGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 4293 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 4294 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 4353 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| |||| Sbjct 4354 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 4413 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGG- 261 | | |||||||| | | || | | |||| |||| |||| | | Sbjct 4414 GAGATCAGACTTG---GTATTTTGTATGTTACTTCTTCGGG-GGTGGCCTCTACAGTTTA 4469 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CTTCGG 320 || |||||||||||| | ||||||| ||| || || || |||||||| | |||||| Sbjct 4470 TCGGGCCAGCATCAGTTTGGGCGGTAGGAGAATTGCGTTGG-AATGTGGCACGGCTTCGG 4528 Query 321 GGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGG-- 377 | ||||||||||| | | || | ||| |||| |||||||| | ||| | Sbjct 4529 TTGTGTGTTATAGCCTTCGTCG--ATACTGCCAGCCTAGACTGAGGACTGCGGTTTATAC 4586 Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 |||||||| |||| ||||| | |||| |||||||||| |||||||||||||||||||| Sbjct 4587 CTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTCTA 4646 Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497 || ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||| Sbjct 4647 ACGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGG 4706 Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4707 GGGCCCGTATGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 4766 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4767 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 4826 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677 ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| Sbjct 4827 ACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAG 4886 Query 678 GGGCGA 683 |||||| Sbjct 4887 GGGCGA 4892 Score = 691 bits (766), Expect = 0.0 Identities = 564/670 (84%), Gaps = 16/670 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| |||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 14912 TGTAAAGTTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 14971 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 14972 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 15031 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| |||| Sbjct 15032 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCTT 15091 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGG- 261 | | |||||||| | | || | | |||| |||| |||| | | Sbjct 15092 GAGATCAGACTTG---GTATTTTGTATGTTACTTCTTCGGG-GGTGGCCTCTACAGTTTA 15147 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CTTCGG 320 || |||||||||||| | ||||||| ||| || || || |||||||| | |||||| Sbjct 15148 TCGGGCCAGCATCAGTTTGGGCGGTAGGAGAATTGCGTTGG-AATGTGGCACGGCTTCGG 15206 Query 321 GGG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGG-- 377 | ||||||||||| | | || | ||| |||| |||||||| | ||| | Sbjct 15207 TTGTGTGTTATAGCCTTCGTCG--ATACTGCCAGCCTAGACTGAGGACTGCGGTTTATAC 15264 Query 378 CTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTA 437 |||||||| |||| ||||| | |||| |||||||||| |||||||||||||||||||| Sbjct 15265 CTAGGATGTTGGCATAATGATCTTAAGTCGCCCGTCTTGAAACACGGACCAAGGAGTCTA 15324 Query 438 ACATCTATGCGAGTGTTTGGGTGTCAAA-CCCGTGCGCGTAATGAAA-GTGAACGGAGGT 495 || ||||||||||||||||||||| ||| ||||| |||||||||||| ||||||| |||| Sbjct 15325 ACGTCTATGCGAGTGTTTGGGTGTAAAAACCCGTACGCGTAATGAAAAGTGAACGTAGGT 15384 Query 496 GGGAA-CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 554 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15385 GGGGGGCCCGTATGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAA 15444 Query 555 GAGCATAGCTGTTGGGACCCGAAA-GATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 15445 GAGCATAGCTGTTGGGACCCGAAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 15504 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct 15505 GGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGT 15564 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 15565 ATAGGGGCGA 15574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079992127850