Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq339 322 8e-86 >seq339 Length=19946 Score = 322 bits (356), Expect = 8e-86 Identities = 230/262 (88%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 3235 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 3176 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG- 119 ||||||||||||||||||||||||| | || ||| | ||||||||||||||||| | Sbjct 3175 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTGACT 3116 Query 120 ---CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 ||| ||| || | | | |||||||| |||||||||||||||||||||||| | Sbjct 3115 ATACCAGCAA--ATGCTAGCAGCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCA 3059 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 3058 ATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATC 2999 Query 237 AAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||||||| Sbjct 2998 AAGAAAGAGCTCTCAATCTGTC 2977 Score = 322 bits (356), Expect = 8e-86 Identities = 230/262 (88%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 13910 TACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAG 13851 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG- 119 ||||||||||||||||||||||||| | || ||| | ||||||||||||||||| | Sbjct 13850 ACCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTGACT 13791 Query 120 ---CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 ||| ||| || | | | |||||||| |||||||||||||||||||||||| | Sbjct 13790 ATACCAGCAA--ATGCTAGCAGCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCA 13734 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 13733 ATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATC 13674 Query 237 AAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||||||| Sbjct 13673 AAGAAAGAGCTCTCAATCTGTC 13652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796797167127