Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq339 257 2e-66 >seq339 Length=19946 Score = 257 bits (284), Expect = 2e-66 Identities = 172/189 (91%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 13152 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 13211 Query 62 ATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 13212 ATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-A 13270 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| ||||||||| |||||||||| |||||| ||||||||||| Sbjct 13271 TCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTC 13330 Query 181 TTGGATTTA 189 ||||||||| Sbjct 13331 TTGGATTTA 13339 Score = 244 bits (270), Expect = 1e-62 Identities = 172/191 (90%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 2 GAACCAGGACTTTT-ACTTTGAAAA-AATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAAT 59 |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 2474 GAACCAGGACTTTTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 2533 Query 60 ACATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACC 118 | |||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||| Sbjct 2534 ATATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC 2593 Query 119 GCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178 ||||||||| |||| ||| ||||||||| |||||||||| |||||| ||||||||| Sbjct 2594 -ATCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAAT 2652 Query 179 TCTTGGATTTA 189 ||||||||||| Sbjct 2653 TCTTGGATTTA 2663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511998179680