Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq339 257 2e-66
>seq339
Length=19946
Score = 257 bits (284), Expect = 2e-66
Identities = 172/189 (91%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 13152 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 13211
Query 62 ATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| |||||||||||||||||||||| | ||||||||||||| |||||||||||||
Sbjct 13212 ATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC-A 13270
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| ||||||||| |||||||||| |||||| |||||||||||
Sbjct 13271 TCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAATTC 13330
Query 181 TTGGATTTA 189
|||||||||
Sbjct 13331 TTGGATTTA 13339
Score = 244 bits (270), Expect = 1e-62
Identities = 172/191 (90%), Gaps = 4/191 (2%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTT-ACTTTGAAAA-AATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAAT 59
|||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 2474 GAACCAGGACTTTTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 2533
Query 60 ACATTACCATGGAATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACC 118
| |||| |||||||||||||||||||||| | ||||||||||||| |||||||||||||
Sbjct 2534 ATATTAGCATGGAATAATAGAATAGGACGTTATGGTTCTATTTTGTTGGTTTCTAGGACC 2593
Query 119 GCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178
||||||||| |||| ||| ||||||||| |||||||||| |||||| |||||||||
Sbjct 2594 -ATCGTAATGATTAATAGGGACGGTCGGGGGTATCAGTATTCAGTTGTCAGAGGTGAAAT 2652
Query 179 TCTTGGATTTA 189
|||||||||||
Sbjct 2653 TCTTGGATTTA 2663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511998179680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |