Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq339 239 7e-61
>seq339
Length=19946
Score = 239 bits (264), Expect = 7e-61
Identities = 230/285 (81%), Gaps = 10/285 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | |||||| |||||||||||||||||||||||| ||||||
Sbjct 6982 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 7039
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 7040 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 7099
Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGCTT--CGGCCCC 176
||||| | || || | ||| ||||| ||| |||||||||| || ||| | | |
Sbjct 7100 GAACGCGACGATTTTTGCCCTACACATTTTAGATGGATACGAATAAGACTTTATGTCGCT 7159
Query 177 GAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCG 233
| ||| |||||||| |||||||| | |||||| || | | ||| || ||||
Sbjct 7160 GGACCATAGCAGGCTGGCAACGGTACACTTAGCGGAAAGGCTTTGTGTGCT-TGCCGGCG 7218
Query 234 GATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||| ||||| ||| |||||| ||||||||||||||||| |||||
Sbjct 7219 GATAGCAATGTCAACATGCGTGGGGATAAATCCTTTGCATACGAC 7263
Score = 233 bits (258), Expect = 3e-59
Identities = 230/286 (80%), Gaps = 11/286 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTT-TGCGGCTGTCTGACCAGGCAG 59
||||||||||||||| | |||||| ||||||||||| ||||||||||||| ||||||
Sbjct 17661 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTTGCGGCTGTCTGATCAGGCAA 17718
Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17719 CGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCT 17778
Query 120 AGAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGCTT--CGGCCC 175
|||||| | || || | ||| ||||| ||| |||||||||| || ||| | | |
Sbjct 17779 AGAACGCGACGATTTTTGCCCTACACATTTTAGATGGATACGAATAAGACTTTATGTCGC 17838
Query 176 CGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGC 232
| ||| |||||||| |||||||| | |||||| || | | ||| || |||
Sbjct 17839 TGGACCATAGCAGGCTGGCAACGGTACACTTAGCGGAAAGGCTTTGTGTGCT-TGCCGGC 17897
Query 233 GGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| ||||| ||| |||||| ||||||||||||||||| |||||
Sbjct 17898 GGATAGCAATGTCAACATGCGTGGGGATAAATCCTTTGCATACGAC 17943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819197087488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |