Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq339 239 7e-61 >seq339 Length=19946 Score = 239 bits (264), Expect = 7e-61 Identities = 230/285 (81%), Gaps = 10/285 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||||||||||||||||||| |||||| Sbjct 6982 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCAAC 7039 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 7040 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 7099 Query 121 GAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGCTT--CGGCCCC 176 ||||| | || || | ||| ||||| ||| |||||||||| || ||| | | | Sbjct 7100 GAACGCGACGATTTTTGCCCTACACATTTTAGATGGATACGAATAAGACTTTATGTCGCT 7159 Query 177 GAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCG 233 | ||| |||||||| |||||||| | |||||| || | | ||| || |||| Sbjct 7160 GGACCATAGCAGGCTGGCAACGGTACACTTAGCGGAAAGGCTTTGTGTGCT-TGCCGGCG 7218 Query 234 GATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||| ||||| ||| |||||| ||||||||||||||||| ||||| Sbjct 7219 GATAGCAATGTCAACATGCGTGGGGATAAATCCTTTGCATACGAC 7263 Score = 233 bits (258), Expect = 3e-59 Identities = 230/286 (80%), Gaps = 11/286 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTT-TGCGGCTGTCTGACCAGGCAG 59 ||||||||||||||| | |||||| ||||||||||| ||||||||||||| |||||| Sbjct 17661 GTACGAGAGGAACCGTTCA-TTCAGA-TAATTGGTTTTTTGCGGCTGTCTGATCAGGCAA 17718 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17719 CGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCT 17778 Query 120 AGAACGGGGTGA-TTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGCTT--CGGCCC 175 |||||| | || || | ||| ||||| ||| |||||||||| || ||| | | | Sbjct 17779 AGAACGCGACGATTTTTGCCCTACACATTTTAGATGGATACGAATAAGACTTTATGTCGC 17838 Query 176 CGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGC 232 | ||| |||||||| |||||||| | |||||| || | | ||| || ||| Sbjct 17839 TGGACCATAGCAGGCTGGCAACGGTACACTTAGCGGAAAGGCTTTGTGTGCT-TGCCGGC 17897 Query 233 GGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||| ||||| ||| |||||| ||||||||||||||||| ||||| Sbjct 17898 GGATAGCAATGTCAACATGCGTGGGGATAAATCCTTTGCATACGAC 17943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197087488