Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05-
08] 367 sequences; 13,991,476 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq325 111 1e-19
seq51 111 1e-19
>seq325
Length=13538
Score = 111 bits (122), Expect = 1e-19
Identities = 293/442 (66%), Gaps = 4/442 (1%)
Strand=Plus/Minus
Query 65123 TAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTT 65182
|||||||| || ||||| | || |||| ||||||||||||| || |||||
Sbjct 12564 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCATAGAAATGCATACTTGTCAATTTA 12505
Query 65183 GC-ATAATTCGGCTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACC 65241
| ||| || || || | || |||||||| || ||| ||||| ||| || | |
Sbjct 12504 CCCATAGTT-GGATCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGC 12446
Query 65242 ACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG 65301
| ||| |||||||| ||||||||| | | || || ||||| || ||||||||||
Sbjct 12445 TCTATCAGCAGCCATATCAATGATATGTTTTTGTGAAATTTCCCAAACAGTCTTGTACAA 12386
Query 65302 GCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAA 65360
| | | | ||| ||| || | | | |||| |||||| | |||||
Sbjct 12385 A-GCCTTGATTTCATCTGGGATGTTTGGCAAACCTTGGATCGAACCATTGTTGGAAATAA 12327
Query 65361 TGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGAC 65420
|| | | ||| | || ||| | ||||||||| | | || | | |||||
Sbjct 12326 TGTTACTCTTCATAGCATCATTCCAAATACCCAAATCAACCAAATCCTTCAACAAGTATG 12267
Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480
|||||| | |||||| || || | || || | | || |||||||| ||| |
Sbjct 12266 GATTGACAATTTGGAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAG 12207
Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540
|||| || ||||| |||| || | ||||| | |||||| ||||||||||| ||||| |
Sbjct 12206 GTTCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAA 12147
Query 65541 CCAACAATGAGTTTCGCAATCC 65562
||||||| ||||||| ||| ||
Sbjct 12146 CCAACAAGGAGTTTCTCAAACC 12125
>seq51
Length=22326
Score = 111 bits (122), Expect = 1e-19
Identities = 293/442 (66%), Gaps = 4/442 (1%)
Strand=Plus/Minus
Query 65123 TAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTT 65182
|||||||| || ||||| | || |||| ||||||||||||| || |||||
Sbjct 20833 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCATAGAAATGCATACTTGTCAATTTA 20774
Query 65183 GC-ATAATTCGGCTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACC 65241
| ||| || || || | || |||||||| || ||| ||||| ||| || | |
Sbjct 20773 CCCATAGTT-GGATCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGC 20715
Query 65242 ACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG 65301
| ||| |||||||| ||||||||| | | || || ||||| || ||||||||||
Sbjct 20714 TCTATCAGCAGCCATATCAATGATATGTTTTTGTGAAATTTCCCAAACAGTCTTGTACAA 20655
Query 65302 GCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAA 65360
| | | | ||| ||| || | | | |||| |||||| | |||||
Sbjct 20654 A-GCCTTGATTTCATCTGGGATGTTTGGCAAACCTTGGATCGAACCATTGTTGGAAATAA 20596
Query 65361 TGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGAC 65420
|| | | ||| | || ||| | ||||||||| | | || | | |||||
Sbjct 20595 TGTTACTCTTCATAGCATCATTCCAAATACCCAAATCAACCAAATCCTTCAACAAGTATG 20536
Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480
|||||| | |||||| || || | || || | | || |||||||| ||| |
Sbjct 20535 GATTGACAATTTGGAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAG 20476
Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540
|||| || ||||| |||| || | ||||| | |||||| ||||||||||| ||||| |
Sbjct 20475 GTTCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAA 20416
Query 65541 CCAACAATGAGTTTCGCAATCC 65562
||||||| ||||||| ||| ||
Sbjct 20415 CCAACAAGGAGTTTCTCAAACC 20394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397566221752880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |