Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20sp._20LDI48194_20[genbank_20GCA_5F001005365.1_202015-05- 08] 367 sequences; 13,991,476 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq325 111 1e-19 seq51 111 1e-19 >seq325 Length=13538 Score = 111 bits (122), Expect = 1e-19 Identities = 293/442 (66%), Gaps = 4/442 (1%) Strand=Plus/Minus Query 65123 TAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTT 65182 |||||||| || ||||| | || |||| ||||||||||||| || ||||| Sbjct 12564 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCATAGAAATGCATACTTGTCAATTTA 12505 Query 65183 GC-ATAATTCGGCTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACC 65241 | ||| || || || | || |||||||| || ||| ||||| ||| || | | Sbjct 12504 CCCATAGTT-GGATCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGC 12446 Query 65242 ACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG 65301 | ||| |||||||| ||||||||| | | || || ||||| || |||||||||| Sbjct 12445 TCTATCAGCAGCCATATCAATGATATGTTTTTGTGAAATTTCCCAAACAGTCTTGTACAA 12386 Query 65302 GCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAA 65360 | | | | ||| ||| || | | | |||| |||||| | ||||| Sbjct 12385 A-GCCTTGATTTCATCTGGGATGTTTGGCAAACCTTGGATCGAACCATTGTTGGAAATAA 12327 Query 65361 TGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGAC 65420 || | | ||| | || ||| | ||||||||| | | || | | ||||| Sbjct 12326 TGTTACTCTTCATAGCATCATTCCAAATACCCAAATCAACCAAATCCTTCAACAAGTATG 12267 Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||||| | |||||| || || | || || | | || |||||||| ||| | Sbjct 12266 GATTGACAATTTGGAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAG 12207 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 |||| || ||||| |||| || | ||||| | |||||| ||||||||||| ||||| | Sbjct 12206 GTTCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAA 12147 Query 65541 CCAACAATGAGTTTCGCAATCC 65562 ||||||| ||||||| ||| || Sbjct 12146 CCAACAAGGAGTTTCTCAAACC 12125 >seq51 Length=22326 Score = 111 bits (122), Expect = 1e-19 Identities = 293/442 (66%), Gaps = 4/442 (1%) Strand=Plus/Minus Query 65123 TAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTT 65182 |||||||| || ||||| | || |||| ||||||||||||| || ||||| Sbjct 20833 TAGTACATACCAGTCTTCAAACCCTTCTTCCAACCATAGAAATGCATACTTGTCAATTTA 20774 Query 65183 GC-ATAATTCGGCTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACC 65241 | ||| || || || | || |||||||| || ||| ||||| ||| || | | Sbjct 20773 CCCATAGTT-GGATCTTTAATGTGAATATTCAAAGATTGAGATTGATCAATGAAAGCAGC 20715 Query 65242 ACGATCTGCAGCCATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAG 65301 | ||| |||||||| ||||||||| | | || || ||||| || |||||||||| Sbjct 20714 TCTATCAGCAGCCATATCAATGATATGTTTTTGTGAAATTTCCCAAACAGTCTTGTACAA 20655 Query 65302 GCGACGT-ACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAA 65360 | | | | ||| ||| || | | | |||| |||||| | ||||| Sbjct 20654 A-GCCTTGATTTCATCTGGGATGTTTGGCAAACCTTGGATCGAACCATTGTTGGAAATAA 20596 Query 65361 TGCGATTACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGAC 65420 || | | ||| | || ||| | ||||||||| | | || | | ||||| Sbjct 20595 TGTTACTCTTCATAGCATCATTCCAAATACCCAAATCAACCAAATCCTTCAACAAGTATG 20536 Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||||| | |||||| || || | || || | | || |||||||| ||| | Sbjct 20535 GATTGACAATTTGGAATTCACCAGCCAAAACTCTTCTAGAGTAAATGTTGGAAGTGTAAG 20476 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 |||| || ||||| |||| || | ||||| | |||||| ||||||||||| ||||| | Sbjct 20475 GTTCGAAACATTCATTGTTACCCAAGATTTGTGAAGTAGAAGCAGTTGGCATTGGAGCAA 20416 Query 65541 CCAACAATGAGTTTCGCAATCC 65562 ||||||| ||||||| ||| || Sbjct 20415 CCAACAAGGAGTTTCTCAAACC 20394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566221752880