Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001600375.1_202016-03-01] 19 sequences; 9,313,034 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 188 6e-43 seq1 174 1e-38 >seq2 Length=2231275 Score = 188 bits (208), Expect = 6e-43 Identities = 586/891 (66%), Gaps = 26/891 (3%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGC-GCATGTA 61100 ||||| || | | | || || ||||||| ||| |||| | || || |||| ||| || Sbjct 2161092 GAGAACCCACATAGGTTTGTGATGTTCCCGATCAAGTACCACGAGATCTGGCAGCAC-TA 2161034 Query 61101 CAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAA 61160 ||||||||| || || || ||||| | |||||| |||| || ||| ||| | | Sbjct 2161033 CAAAAAGGCAGAGGCGAGTTTTTGGACCGCCGAGGAGATCGACCTGGGCAAGGACCTTCA 2160974 Query 61161 TGACTGGGAGCGT-TTATCGA-GC-GGTGAACAACATTTCATTAAACATGTGTTGGCGTT 61217 |||||||| | | ||| | || | ||||| |||||||| | |||| | || || Sbjct 2160973 CGACTGGGAACATCGTATGAATGCTGATGAACGTTATTTCATTTCCCGTGTGCTTGCCTT 2160914 Query 61218 CTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGT 61277 || || || || |||||||||||||| || || || | || |||| | || || Sbjct 2160913 TTTCGCGGCATCCGACGGTATCGTCAACGAAAACTTGGTACAAAATTTCAGTGACGACGT 2160854 Query 61278 GCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTC 61337 || | | ||||| || || || ||||||||||| || |||||| ||||||| Sbjct 2160853 CCAGATCCCCGAGGCTAAGTGCTTTTATGGCTTCCAGATAATGATTGAGAATATCCACTC 2160794 Query 61338 GGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATT 61397 |||| |||| | || || ||||| || || | ||| | ||| | | || Sbjct 2160793 TGAGACGTACTCACTACTAATTGATACCTATATTAAGGATCCCAAAGAAGCTAATTATTT 2160734 Query 61398 GTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGC-CTTCAATT 61456 ||| ||||| ||||| | || | | | ||| || || ||||| |||| | Sbjct 2160733 GTTTAATGCAATCGATAACATTGGGCCCATCCGCAAGAAGGCCGACTGGGCTCTTC-GCT 2160675 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 |||||| | | | | ||| |||| ||| || | | || ||||||| | |||| Sbjct 2160674 GGATCAACGACAGAGACGTTACTTTTGCTGAGCGTCTTGTCGCTTTTGCGGCCATTGAGG 2160615 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | || || |||||||| || || || | || || ||| | ||||||||||| || |||| Sbjct 2160614 GCGTCTTCTTCAGTGGGTCTTTCGCATCCATTTTCTGGCTCAAGAAACGTGGTCTCATGC 2160555 Query 61577 CCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG 61636 | || ||||| ||| |||||| | || ||||| || ||||| ||||| ||||||| Sbjct 2160554 CTGGGCTGACGTTCTCTAATGAGCTCATCTCACGAGATGAGGGTATGCACACCGATTTTG 2160495 Query 61637 C---TGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG--GAGGAGCGTGTGGG 61691 | || ||| ||| || |||| || ||||| ||| ||||| || || | Sbjct 2160494 CATGCGTCTTG---TTC---GGCCATCTCACTAACCGTCCCTCGAAGAGGATTGT-TGAG 2160442 Query 61692 TGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGT 61751 | ||| | |||||| || ||| || | || || | |||| || | || || Sbjct 2160441 CG-CATTATAACTGAGGCTGTCGATATTGAGCTCGACTTCTGGGCTGATGCGCTTCCTGT 2160383 Query 61752 CTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCG 61811 || | | || |||||| | || ||| ||||||||| |||| ||||| || || Sbjct 2160382 TTCGTTGCTTGGTATGAATGCTAAGCTCATGGATCAGTATATTCAATTCGTTGCTGATCG 2160323 Query 61812 TCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAA---TACGAAAAACCCATTTGATTT 61868 | || | || | | |||| || | | || || |||| ||||| || || || Sbjct 2160322 TTTGCTCGTGGCCCTCGGTAACGAGAAGGTGTACAAGGTTACG---AACCCTTTCGACTT 2160266 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||||| | ||||| || | ||| ||||| || || ||||||||||| || Sbjct 2160265 CATGGAAAATATTTCTCTCGCTGGAAAGACAAACTTCTTCGAGAAACGGGT 2160215 >seq1 Length=4294417 Score = 174 bits (192), Expect = 1e-38 Identities = 625/964 (65%), Gaps = 24/964 (2%) Strand=Plus/Minus Query 66007 GGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTC 66066 ||| ||||| || || ||||| || || |||| || || | | ||||| || || || Sbjct 3285113 GGCCAGAGAGGCAAGATTGCACACTGCAGTCTCCTCTGGGGACGAGTACTCAACGATCTC 3285054 Query 66067 GGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTG 66124 | ||| || || || | | || || || | || || |||||| ||||| ||| Sbjct 3285053 GCAGCAAAGGTT--TGATGACTTGATCGTACCAAGGTTTTGCTGATTAGATTTGCGGTTG 3284996 Query 66125 CATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCG 66184 || |||||||| |||| ||| | || || || |||||| ||| | ||| || |||| Sbjct 3284995 CAGGCATCCTTATACAGCATAAATGGGGTTCCAGTCTCAGTTTGAGCCTCTATAATGGAA 3284936 Query 66185 TGCCAAAGAGCGCGTGCCTTCACCGTACGT--ACC---GCCCTACCTTTGCGTTCGTAAT 66239 | ||| || | || || | || || ||| ||||| ||||| | | || Sbjct 3284935 TACCATAGCTTCTGAGCTTTAATGGTGCGACGACCTCTGCCCT-CCTTTTCAT-----AT 3284882 Query 66240 GTTCGTAGA--GGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTG 66297 || |||| | | | |||||| ||||| | || || || |||| ||| |||| | Sbjct 3284881 GT-CGTATAAAGTTTTTCGAACTCCTCACCGTAAACATCAGAGAGACCTGGGCACTCATT 3284823 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 |||||||| || | ||| || |||| | || || || ||||||||| || || || Sbjct 3284822 GGGACACATTAGAGTCCAGTCCCCATTATCTTTCACCCGCTGCATAAATAAGTCGGGAAT 3284763 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 ||| || || ||| | ||| || || || ||| || | || ||||| ||||||| Sbjct 3284762 CCAAAGTGCAACGAAAATATCACGGGCACGAATCTCTTCCTTACCATGATTCTTGCGCAC 3284703 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 || | | ||||| || || ||||||| || || | || || || || | || Sbjct 3284702 ATCAATGGTATCAAAAATATCATCATGCCACGGCTCAATATACATCGCAAAGGCACCAGG 3284643 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 || ||| ||||||||||| || |||||||| ||| ||| ||||||||||||| || Sbjct 3284642 TCGCTTGTTACCACCTTGGTCAACATAGCGAGCAGTATTATTGTAGACACGCAACATGGG 3284583 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATAT 66596 | ||||| || || | ||||| || || ||||| || || ||| || || || | Sbjct 3284582 AATAAGCCCATTGGAAGTACCATTTGTACCAGCGATGTAAGAGCC-CGTGGCACGAATGT 3284524 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTG 66656 ||||| | | || ||||| || ||||| |||| || || ||||| || | | Sbjct 3284523 TGTGAATACTGAGGCCAATTCCTCCGGCATTCTTTGAAATCAAGGCACATTCCTTGAGCG 3284464 Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716 | | || || ||||| ||| |||| || || | | | |||| ||| | || Sbjct 3284463 TATCATAGATACCATCAATACTATCATCCTTCATCGTTACCAAGAAGCAGGAAGACATTT 3284404 Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAG 66776 | || || || || | || | ||||||| || | || || | ||||| | | | Sbjct 3284403 GTGGCTTTGGAGTTCCTGCATTGTAGAGGGTTGGACTGGCATGAATGAAGTATTTTTGTG 3284344 Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCAC 66836 |||| | | ||| || |||| ||||| || | |||||||| || || | ||| Sbjct 3284343 ACATCCATTGGTAGGTTTCGAGAACAGCTGGGATATCCTCGCCATGGATACCCACGGCAA 3284284 Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCA-GCCGATCCTTGATA-TGCATTAAGTA 66894 || ||| | | || ||||| | ||| ||| || || | ||| | || | ||| Sbjct 3284283 CTCTCATTATCATGTGCTGAGGTCTTTC--CCATACCTTACCATTATACTTCAGCAGGTA 3284226 Query 66895 GGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGAT 66954 || || |||| ||||||| || ||| | | ||||||| || | ||| ||| || Sbjct 3284225 TGATCGCTCCAATGTCTTGAATCCGAAGAAATTGAAATTGAAGTCTCGATCATACACTAT 3284166 Query 66955 GGCC 66958 ||| Sbjct 3284165 TGCC 3284162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567907938160