Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq15 666 0.0 >seq15 Length=39790 Score = 666 bits (738), Expect = 0.0 Identities = 556/674 (82%), Gaps = 30/674 (4%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| |||||||||||||||||||||||||||||| |||| |||||||| | ||||||| Sbjct 11105 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAATTCCATCTAAAG 11046 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||| ||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 11045 CTAAATACAGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 10986 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 10985 TTGAAAAGAGAGTGAAAAAGGACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACA 10926 Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCG--GCCGGTGCACTCTTCTGCGGTCA---GGCC 268 || ||| | | || ||||| | || | | ||| | | ||| |||| Sbjct 10925 TGGTGTTTTGTGCCCCTC--GCTCCTCGTGGGTGGGGGAATCT-CGCAGCTCACTGGGCC 10869 Query 269 AGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC---CTTCGGGGGG- 324 |||||||| | ||||| ||||||| | | ||||||||||| | ||||||| || Sbjct 10868 AGCATCAGTTTTGGCGGCAGGATAAAT-CTCTGGGAATGTGGCTTCTTTCTTCGGGAGGG 10810 Query 325 --TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC---TCCGGCT 379 ||||||||||| ||| |||| | ||| || |||||||||| ||| | | | Sbjct 10809 AGTGTTATAGCCCAGGG--GAATACTGCCAGCTGGGACTGAGGTATGCGACATTTTGTCA 10752 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| |||| |||||||| || || |||||||||| |||||||||||||||||||||| Sbjct 10751 AGGATGTTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAAC 10692 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 ||||||| ||||||||||||| |||||||| ||||||||||||||||||| |||| || Sbjct 10691 GTCTATGCAAGTGTTTGGGTGTGAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGG 10632 Query 500 ACCCGT----------GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTG 549 ||| | | |||||||| ||||||||||||||||||||||||||||||||| Sbjct 10631 GCCCTTCCTTCTGGGGGGGGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTG 10572 Query 550 AGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 609 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 10571 AGTAAGAGCATAGCTGTTAGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGC 10512 Query 610 CAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTT 669 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| Sbjct 10511 CAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTT 10452 Query 670 GGGTATAGGGGCGA 683 |||||||||||||| Sbjct 10451 GGGTATAGGGGCGA 10438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998884600