Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Candida_20versatilis_20[genbank_20GCA_5F001659765.1_202016-06-08] 52 sequences; 10,081,862 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq6 102 3e-16 seq51 100 1e-15 >seq6 Length=915354 Score = 102 bits (112), Expect = 3e-16 Identities = 208/309 (67%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 12736 ATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAAT 12795 |||||| | || || | ||| || | | || |||||||| || | ||||||||||| Sbjct 240814 ATCGTAGTATAACACATGCATACCCATAGCTTCCGCTAGGACGGATAATTGAGAACCAAT 240873 Query 12796 GTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGT 12855 || ||||||||| | ||||| | || || ||||||||||| | || | | ||| Sbjct 240874 GTGACCATAACCAATGATACCCAAAGTTTTACCTCTAACTTCCCAACACCTGTTGGAAAC 240933 Query 12856 CTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATT 12915 |||||||| ||| ||||||||| | |||||| || | || | | | | | Sbjct 240934 TTTGTTCCATGCACCTGTGTGTAGTTCGATAGATCTATCACCCAGTTGTCTGGCTAAACT 240993 Query 12916 AATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAA 12975 || | || || ||||| | || || || ||||||| ||| | || ||||| || || Sbjct 240994 GATGATTTCACCAATGATTAATTCCGCTACACTTCTAGAGTTAGAGAATGGAGAGTTGAA 241053 Query 12976 GACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAA 13035 || ||||| ||| | ||| || | ||||| ||| || | | |||||| ||||| Sbjct 241054 AACGGCAATACCTGCATGGGTGGCATATTTTAGATCAACTTGGTTGGTACCAATACAGAA 241113 Query 13036 GCATCCTAT 13044 || || || Sbjct 241114 ACAACCGAT 241122 >seq51 Length=2119 Score = 100 bits (110), Expect = 1e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 ||||||||||| ||||||| ||||||||||||| | ||||| || || || ||||| Sbjct 520 GTCATACGAGATGGAATGGCATGAGGGTTGATGATCAAATCAGGTACAATACCTTCAGCA 579 Query 364490 GTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGA 364549 ||||| ||||||||||| | | | | | ||||||||| |||||||| | | ||| Sbjct 580 GTAAATGGCATATCTTCTCTACCATAGGTAATACCAATGGTACCCTTTTGACCGTGACGA 639 Query 364550 GAAGCAAACTTGTCGCCAAT 364569 || ||||| || || || || Sbjct 640 GATGCAAATTTATCACCGAT 659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885144194436