Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08]
53 sequences; 11,992,787 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq41 385 1e-104
>seq41
Length=1865
Score = 385 bits (426), Expect = 1e-104
Identities = 373/477 (78%), Gaps = 17/477 (4%)
Strand=Plus/Minus
Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82
|| |||| ||||||| |||||||||||| || ||||||| | | |||||| |
Sbjct 1174 AGTGGCGCACGGGTGCGTAACGCGTGGG-AATCTGCCCTTTGGTTCGGAATAACAGTTGG 1116
Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCCG 142
||| | ||||||||| ||| || || || |||| ||||| |
Sbjct 1115 AAACGACTGCTAATACCGGATGATG-ACGTT-------------AAGTC-CAAAGATTTA 1071
Query 143 GCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGC 202
|| | ||||| ||||||| ||||||||||||||| ||||| ||| ||||||||
Sbjct 1070 TCGCCAGAGGATGAGCCCGCGTAGGATTAGCTAGTTGGTGTGGTAAAGGCGCACCAAGGC 1011
Query 203 GACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAA 262
||||||| |||| | |||||||| ||||| |||||| ||| |||||||||||| |||
Sbjct 1010 GACGATCCTTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAG 951
Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322
|||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||
Sbjct 950 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAA 891
Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGA 382
|||||||||| |||||||||| | |||| |||||||||| | | ||| ||||||||
Sbjct 890 TGCCGCGTGAGTGATGAAGGCCCTAGGGTTGTAAAGCTCTTTTACCCGGGATGATAATGA 831
Query 383 CGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGG 442
| |||| | || ||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 830 CAGTACCGGGAGAATAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGG 771
Query 443 GGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499
|||||||||| | |||||||||| |||||||||| | |||||| || || |||||
Sbjct 770 GGCTAGCGTTGTTCGGAATTACT-GGGCGTAAAGCGCACGTAGGCGGCTTTGTAAGT 715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497599206272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |