Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavispora_20lusitaniae_20[genbank_20GCA_5F001673695.2_202017-06-08] 53 sequences; 11,992,787 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq41 385 1e-104 >seq41 Length=1865 Score = 385 bits (426), Expect = 1e-104 Identities = 373/477 (78%), Gaps = 17/477 (4%) Strand=Plus/Minus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 || |||| ||||||| |||||||||||| || ||||||| | | |||||| | Sbjct 1174 AGTGGCGCACGGGTGCGTAACGCGTGGG-AATCTGCCCTTTGGTTCGGAATAACAGTTGG 1116 Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTCCG 142 ||| | ||||||||| ||| || || || |||| ||||| | Sbjct 1115 AAACGACTGCTAATACCGGATGATG-ACGTT-------------AAGTC-CAAAGATTTA 1071 Query 143 GCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGC 202 || | ||||| ||||||| ||||||||||||||| ||||| ||| |||||||| Sbjct 1070 TCGCCAGAGGATGAGCCCGCGTAGGATTAGCTAGTTGGTGTGGTAAAGGCGCACCAAGGC 1011 Query 203 GACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAA 262 ||||||| |||| | |||||||| ||||| |||||| ||| |||||||||||| ||| Sbjct 1010 GACGATCCTTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAG 951 Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322 |||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| Sbjct 950 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCAA 891 Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGA 382 |||||||||| |||||||||| | |||| |||||||||| | | ||| |||||||| Sbjct 890 TGCCGCGTGAGTGATGAAGGCCCTAGGGTTGTAAAGCTCTTTTACCCGGGATGATAATGA 831 Query 383 CGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGG 442 | |||| | || ||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 830 CAGTACCGGGAGAATAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGG 771 Query 443 GGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||||||||| | |||||||||| |||||||||| | |||||| || || ||||| Sbjct 770 GGCTAGCGTTGTTCGGAATTACT-GGGCGTAAAGCGCACGTAGGCGGCTTTGTAAGT 715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497599206272