Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001599195.1_202016-03- 01] 12 sequences; 12,303,847 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 1e-14 seq4 95.1 5e-14 >seq1 Length=3147266 Score = 96.9 bits (106), Expect = 1e-14 Identities = 280/425 (66%), Gaps = 12/425 (3%) Strand=Plus/Minus Query 12627 TGGTGTCTTTGGTATCTGGAACGTGCAAGGTTACAAAGTCGGAACGAGACAAGAGACCTT 12686 |||| ||| |||| |||| ||||| | || | |||||| || |||||| | | Sbjct 840184 TGGTCTCTGGGGTAGCTGGGACGTGACATGTGATAAAGTCAGATTTCTCCAAGAGTTCAT 840125 Query 12687 GCAGAGTAGACACTTGCTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACATCGTAAAAGA 12746 |||||| ||| ||||| ||| || || | | || ||| |||||||| | | Sbjct 840124 TGAGAGTACTCACCTGCTTGGAGTTACCAAGGGCCATGATCATGACGACATCGTAGTACA 840065 Query 12747 AAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAAC 12806 |||| ||||| || | | ||| || || || || | ||| |||||||||| ||| |||| Sbjct 840064 AAACATTCATACCCAAAGCCTCAGCGAGCACGGACAACTGGGAACCAATGTGACCGTAAC 840005 Query 12807 CTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGT---CTTGTTCC 12863 | | ||||| | ||||| ||||||||||| |||| | || | | |||||||| Sbjct 840004 CGATGATACCCAATGTCTTACCTCTAACTTC---CCAACACTTAGCACTGACCTTGTTCC 839948 Query 12864 AAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTT 12923 | | || ||| | || | ||| || |||| || | || || || | | Sbjct 839947 AGGTACCAGTGTGCAACTCGATCGATCTGTCACCAAGTTGTCTAGCGAGGGAGATGATCT 839888 Query 12924 GTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAA 12983 | |||| | ||| || || ||||| |||| | || ||||| || ||||| |||| Sbjct 839887 CGGCAATGACCAACTCAGCAACAGATCTAGAGTTGGAGAATGGAGAGTTGAAGACAGCAA 839828 Query 12984 TGCC--TAGTTTGGTAGCCATGTCTAGATTAACCTGA-TCGTAACCAATGCAGAAGCATC 13040 || ||| | | || | ||| | || ||||||| |||| ||| || ||||| || | Sbjct 839827 CACCCTTAG--TAGCGGCAAAGTCCAAATCAACCTGATTCGT-ACCGATACAGAAACAAC 839771 Query 13041 CTATG 13045 | ||| Sbjct 839770 CAATG 839766 >seq4 Length=1873953 Score = 95.1 bits (104), Expect = 5e-14 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 ||| |||||||||||| ||||||| | | || ||||| |||| ||| || || || || | Sbjct 836912 CAACAGTCATACGAGATGGAATGGCGTGTGGATTGATAATGAGGTCTGGAACAATACCTT 836971 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 || || || |||||||| || || || ||| | | ||| ||||| ||||| || | Sbjct 836972 CACTTGTGAATGGCATATCCTCACGACGGTACG-TCACACCGATGGTACCCTTCTGACCG 837030 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| ||||||||||| ||||| Sbjct 837031 TGACGAGAGGCAAACTTGTCACCAAT 837056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884886110198716