Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq22 389 7e-106
seq1 389 7e-106
seq24 383 3e-104
seq23 376 5e-102
>seq22
Length=13683
Score = 389 bits (430), Expect = 7e-106
Identities = 280/318 (88%), Gaps = 10/318 (3%)
Strand=Plus/Plus
Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60
|||| | ||| ||| |||||||||||||| | | || || ||| ||| || ||
Sbjct 3225 TACTGGTTCCAACCGAGCCTTTCCTTCTGGCTAACT--AT-CCTTTC---GGGGGTAGCG 3278
Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3279 ---AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 3335
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3336 ATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCA 3395
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 3396 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 3455
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||
Sbjct 3456 TTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA 3515
Query 301 GTGAACGAAAGTTAGGGG 318
||||||||||||||||
Sbjct 3516 -AGAACGAAAGTTAGGGG 3532
Score = 327 bits (362), Expect = 2e-87
Identities = 268/318 (84%), Gaps = 22/318 (7%)
Strand=Plus/Plus
Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60
|||| | ||| ||| |||||||||||||| | | || || ||| ||| || ||
Sbjct 11794 TACTGGTTCCAACCGAGCCTTTCCTTCTGGCTAACT--AT-CCTTTC---GGGGGTAGCG 11847
Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 11848 ---AACCAGGACTTTTACTTTGAAAAAATTAG----TTCAAAGCAGGCCTTTGCTCGAAT 11900
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 11901 ATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCA 11960
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
||||||||||| ||||| ||| |||| ||||| |||||||||||||||||||
Sbjct 11961 TCGTAATGATTA--AGGGACGGTC-GGGGCATCAGT-----ATTGTCAGAGGTGAAATTC 12012
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||
Sbjct 12013 TTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA 12072
Query 301 GTGAACGAAAGTTAGGGG 318
||||||||||||||||
Sbjct 12073 -AGAACGAAAGTTAGGGG 12089
>seq1
Length=2087116
Score = 389 bits (430), Expect = 7e-106
Identities = 280/318 (88%), Gaps = 10/318 (3%)
Strand=Plus/Plus
Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60
|||| | ||| ||| |||||||||||||| | | || || ||| ||| || ||
Sbjct 2078856 TACTGGTTCCAACCGAGCCTTTCCTTCTGGCTAACT--AT-CCTTTC---GGGGGTAGCG 2078909
Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2078910 ---AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 2078966
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2078967 ATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCA 2079026
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 2079027 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 2079086
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||
Sbjct 2079087 TTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA 2079146
Query 301 GTGAACGAAAGTTAGGGG 318
||||||||||||||||
Sbjct 2079147 -AGAACGAAAGTTAGGGG 2079163
>seq24
Length=9160
Score = 383 bits (424), Expect = 3e-104
Identities = 280/319 (88%), Gaps = 11/319 (3%)
Strand=Plus/Plus
Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60
|||| | ||| ||| |||||||||||||| | | || || ||| ||| || ||
Sbjct 1087 TACTGGTTCCAACCGAGCCTTTCCTTCTGGCTAACT--AT-CCTTTC---GGGGGTAGCG 1140
Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 ---AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 1197
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1198 ATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCA 1257
Query 181 CCGTAATGATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239
|||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||
Sbjct 1258 TCGTAATGATTAATAGGGACGGTCGGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATT 1317
Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299
|||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||
Sbjct 1318 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 1377
Query 300 AGTGAACGAAAGTTAGGGG 318
| ||||||||||||||||
Sbjct 1378 A-AGAACGAAAGTTAGGGG 1395
>seq23
Length=12092
Score = 376 bits (416), Expect = 5e-102
Identities = 280/323 (87%), Gaps = 15/323 (5%)
Strand=Plus/Plus
Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60
|||| | ||| ||| |||||||||||||| | | || || ||| ||| || ||
Sbjct 7441 TACTGGTTCCAACCGAGCCTTTCCTTCTGGCTAACT--AT-CCTTTC---GGGGGTAGCG 7494
Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7495 ---AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 7551
Query 121 ACATTAGCATGGAATAATA-----GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAG 175
| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 7552 ATATTAGCATGGAATAATAGAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAG 7611
Query 176 GACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGA 235
|||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 7612 GACCATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGA 7671
Query 236 AATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295
|||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct 7672 AATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATT 7731
Query 296 AATCAGTGAACGAAAGTTAGGGG 318
||||| ||||||||||||||||
Sbjct 7732 AATCA-AGAACGAAAGTTAGGGG 7753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199771200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |