Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq22 268 9e-70 seq1 268 9e-70 seq24 260 1e-67 seq23 253 2e-65 >seq22 Length=13683 Score = 268 bits (296), Expect = 9e-70 Identities = 174/190 (92%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 3278 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 3337 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 3338 ATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-AT 3396 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||| Sbjct 3397 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 3456 Query 182 TGGATTTATT 191 |||||||||| Sbjct 3457 TGGATTTATT 3466 Score = 210 bits (232), Expect = 2e-52 Identities = 163/190 (86%), Gaps = 13/190 (7%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 11847 GAACCAGGACTTTTACTTTGAAAAAATTAG----TTCAAAGCAGGCCTTTGCTCGAATAT 11902 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 11903 ATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-AT 11961 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| | | ||| ||| |||| ||||| ||||||| |||||||||||| Sbjct 11962 CGTAATGATTA--AGGGACGGTC-GGGGCATCAGT-----ATTGTCAGAGGTGAAATTCT 12013 Query 182 TGGATTTATT 191 |||||||||| Sbjct 12014 TGGATTTATT 12023 >seq1 Length=2087116 Score = 268 bits (296), Expect = 9e-70 Identities = 174/190 (92%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2078909 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 2078968 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 2078969 ATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-AT 2079027 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||| Sbjct 2079028 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 2079087 Query 182 TGGATTTATT 191 |||||||||| Sbjct 2079088 TGGATTTATT 2079097 >seq24 Length=9160 Score = 260 bits (288), Expect = 1e-67 Identities = 174/191 (91%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1140 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 1199 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 1200 ATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-AT 1258 Query 122 CGTAATGATAAATACGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| ||| ||||| ||||||||||||||||| ||||||||||| Sbjct 1259 CGTAATGATTAATAGGGACGGTCGGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 1318 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 1319 TTGGATTTATT 1329 >seq23 Length=12092 Score = 253 bits (280), Expect = 2e-65 Identities = 174/195 (89%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 7494 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 7553 Query 62 ATTACCATGGAAT-----AATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA 116 |||| |||||||| ||||||||||||||| ||||||||||||| ||||||||||| Sbjct 7554 ATTAGCATGGAATAATAGAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGA 7613 Query 117 CCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAA 176 || ||||||||| |||| ||| |||||||| ||||||||||||||||| ||||||| Sbjct 7614 CC-ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAA 7672 Query 177 ATTCTTGGATTTATT 191 ||||||||||||||| Sbjct 7673 ATTCTTGGATTTATT 7687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999876000