Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02-
02] 25 sequences; 12,188,250 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq22 268 9e-70
seq1 268 9e-70
seq24 260 1e-67
seq23 253 2e-65
>seq22
Length=13683
Score = 268 bits (296), Expect = 9e-70
Identities = 174/190 (92%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3278 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 3337
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 3338 ATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-AT 3396
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 3397 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 3456
Query 182 TGGATTTATT 191
||||||||||
Sbjct 3457 TGGATTTATT 3466
Score = 210 bits (232), Expect = 2e-52
Identities = 163/190 (86%), Gaps = 13/190 (7%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 11847 GAACCAGGACTTTTACTTTGAAAAAATTAG----TTCAAAGCAGGCCTTTGCTCGAATAT 11902
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 11903 ATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-AT 11961
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| | | ||| ||| |||| ||||| ||||||| ||||||||||||
Sbjct 11962 CGTAATGATTA--AGGGACGGTC-GGGGCATCAGT-----ATTGTCAGAGGTGAAATTCT 12013
Query 182 TGGATTTATT 191
||||||||||
Sbjct 12014 TGGATTTATT 12023
>seq1
Length=2087116
Score = 268 bits (296), Expect = 9e-70
Identities = 174/190 (92%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2078909 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 2078968
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 2078969 ATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-AT 2079027
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
||||||||| |||| ||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 2079028 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 2079087
Query 182 TGGATTTATT 191
||||||||||
Sbjct 2079088 TGGATTTATT 2079097
>seq24
Length=9160
Score = 260 bits (288), Expect = 1e-67
Identities = 174/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1140 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 1199
Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1200 ATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-AT 1258
Query 122 CGTAATGATAAATACGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| ||| ||||| ||||||||||||||||| |||||||||||
Sbjct 1259 CGTAATGATTAATAGGGACGGTCGGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 1318
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 1319 TTGGATTTATT 1329
>seq23
Length=12092
Score = 253 bits (280), Expect = 2e-65
Identities = 174/195 (89%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 7494 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATAT 7553
Query 62 ATTACCATGGAAT-----AATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGA 116
|||| |||||||| ||||||||||||||| ||||||||||||| |||||||||||
Sbjct 7554 ATTAGCATGGAATAATAGAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGA 7613
Query 117 CCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAA 176
|| ||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||
Sbjct 7614 CC-ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAA 7672
Query 177 ATTCTTGGATTTATT 191
|||||||||||||||
Sbjct 7673 ATTCTTGGATTTATT 7687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511999876000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |