Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20fabianii_20[genbank_20GCA_5F001983305.1_202017-02- 02] 25 sequences; 12,188,250 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq5 102 3e-16 seq2 95.1 5e-14 >seq5 Length=1064489 Score = 102 bits (112), Expect = 3e-16 Identities = 281/425 (66%), Gaps = 12/425 (3%) Strand=Plus/Minus Query 12627 TGGTGTCTTTGGTATCTGGAACGTGCAAGGTTACAAAGTCGGAACGAGACAAGAGACCTT 12686 |||| ||| |||| |||| ||||| | || | |||||| || |||||| | | Sbjct 813278 TGGTCTCTGGGGTAGCTGGGACGTGACATGTGATAAAGTCAGATTTCTCCAAGAGTTCAT 813219 Query 12687 GCAGAGTAGACACTTGCTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACATCGTAAAAGA 12746 |||||| ||| ||||| ||| || || | | || ||| |||||||| | | Sbjct 813218 TGAGAGTACTCACCTGCTTGGAGTTACCAAGGGCCATGATCATGACGACATCGTAGTACA 813159 Query 12747 AAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAAC 12806 |||| ||||| || | | ||| || || || || | ||| |||||||||| ||| |||| Sbjct 813158 AAACATTCATACCCAAAGCCTCAGCGAGCACGGACAACTGGGAACCAATGTGACCGTAAC 813099 Query 12807 CTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGT---CTTGTTCC 12863 | | ||||| | ||||| ||||||||||| |||| | || | | |||||||| Sbjct 813098 CGATGATACCCAATGTCTTACCTCTAACTTC---CCAACACTTAGCACTGACCTTGTTCC 813042 Query 12864 AAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTT 12923 | | || ||| | || | ||| || |||| || | || || || | | Sbjct 813041 AGGTACCAGTGTGCAACTCGATCGATCTGTCACCAAGTTGTCTAGCGAGGGAGATGATCT 812982 Query 12924 GTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAA 12983 | |||| | ||| || ||| ||||| |||| | || ||||| || ||||| |||| Sbjct 812981 CGGCAATGACCAACTCAGCAACGGATCTAGAGTTGGAGAATGGAGAGTTGAAGACAGCAA 812922 Query 12984 TGCC--TAGTTTGGTAGCCATGTCTAGATTAACCTGA-TCGTAACCAATGCAGAAGCATC 13040 || ||| | | || | ||| | || ||||||| |||| ||| || ||||| || | Sbjct 812921 CACCCTTAG--TAGCGGCAAAGTCCAAATCAACCTGATTCGT-ACCGATACAGAAACAAC 812865 Query 13041 CTATG 13045 | ||| Sbjct 812864 CAATG 812860 >seq2 Length=1705267 Score = 95.1 bits (104), Expect = 5e-14 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 ||| |||||||||||| ||||||| | | || ||||| |||| ||| || || || || | Sbjct 841687 CAACAGTCATACGAGATGGAATGGCGTGTGGATTGATAATGAGGTCTGGAACAATACCTT 841746 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 || || || |||||||| || || || ||| | | ||| ||||| ||||| || | Sbjct 841747 CACTTGTGAATGGCATATCCTCACGACGGTACG-TCACACCGATGGTACCCTTCTGACCG 841805 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||| ||||||||||| ||||| Sbjct 841806 TGACGAGAGGCAAACTTGTCACCAAT 841831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885796247325