Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26]
7 sequences; 12,707,304 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq6 192 5e-44
seq5 163 2e-35
seq4 131 1e-25
>seq6
Length=1261692
Score = 192 bits (212), Expect = 5e-44
Identities = 394/576 (68%), Gaps = 11/576 (2%)
Strand=Plus/Plus
Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110
||||||||||| | ||||| || |||| | || ||||||| ||| || |||||
Sbjct 57915 CGTCGTTTCGTCCTCTTCCCTATTAAGTACCATGAGATTTGGCAAGCGTATAAGAAGGCT 57974
Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170
|| |||||||||||||| | |||||| | ||||| || || || || | |||||| |
Sbjct 57975 GAGGCTTCCTTCTGGACTGCCGAGGAGATTGATTTATCAAAGGATTTGCACGACTGGAAC 58034
Query 61171 CGTTTATCGAGCGGTGAACAA-CATTTCATTA----AACATGTGTTGGCGTTCTTTGCCG 61225
|| || || |||| | | |||| | | || | ||| |||| || |||||||
Sbjct 58035 AACAGATTGAACGA-GAACGAGCGTTTCTTCATCTCAAGA-GTGCTGGCCTTTTTTGCCG 58092
Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGC-GCAGGAGGTGCAAGTG 61284
|||| |||||||||||||| ||||| || | ||| ||| | ||| ||||| ||| |
Sbjct 58093 CTTCTGACGGTATCGTCAACGAGAACTTGGTTGAAAACTTCTCTGCA-GAGGTTCAAATC 58151
Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344
| ||||| || ||||| || |||||||| |||||||| ||||||| ||||
Sbjct 58152 CCAGAGGCTAAGTGCTTCTATGGGTTCCAGATCATGATGGAGAACATCCACTCTGAGACT 58211
Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404
||| | | ||||| || ||||||| ||| | ||| ||| ||||||||
Sbjct 58212 TACTCCTTGTTGATCGACACCTACATCAAGGACCCAAAGGAGGCTGAGTTCTTGTTCAAC 58271
Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC 61464
||||| || || || || | ||| ||| || |||||||| || | ||||| ||
Sbjct 58272 GCCATTGAAACCATCCCATGTATCAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCC 58331
Query 61465 -AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523
| | || || ||||| || || | | || ||||| | || || ||| | ||
Sbjct 58332 GATGATGAC-GCCCTATTTGCAGAGAGACTCGTTGCTTTTGCTGCTGTTGAAGGTATCTT 58390
Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583
||| || || || ||| | ||||||||||||||||| | || | ||||| ||| |
Sbjct 58391 CTTCTCCGGTTCATTCGCCTCCATCTTTTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTT 58450
Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619
||||||| || |||||||| | || ||||| ||
Sbjct 58451 GACCTTCTCTAACGAGTTGATTTGCCGTGACGAAGG 58486
>seq5
Length=1517892
Score = 163 bits (180), Expect = 2e-35
Identities = 614/949 (65%), Gaps = 22/949 (2%)
Strand=Plus/Minus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|||||||||| ||||| | ||| || ||||| | |||||| |||| | |||||||||
Sbjct 776058 GGAAGGGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACA 775999
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119
|| || |||| || | || | ||| | ||||| |||| ||||| |||
Sbjct 775998 ATCTCACAACACAAGTTC--GAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTT 775941
Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179
|| || ||||| || || | |||| | || || || || ||| || | ||| | ||
Sbjct 775940 TGTTACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGA 775881
Query 66180 TGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAA 66238
| || | ||| || | |||||||| || | | | || | ||||| |||||||
Sbjct 775880 TCGCATACCAGAGCTTTTGAGCCTTCACAGT-CTTTCTTCCTTTACCTTCTTGTTCGTAC 775822
Query 66239 TGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGT 66298
| | || | ||| || ||||| || | || | || | | | || | |
Sbjct 775821 TTTGTATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTT 775762
Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358
||| | | | | ||| ||||| | |||||| ||||| ||| || ||||| || |||
Sbjct 775761 GGAGAGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATC 775702
Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418
|| | ||| ||| | ||| || |||| ||| || | ||||| || || | |
Sbjct 775701 CACAAGGCTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATA 775642
Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478
|||| ||| |||||||| || || |||||||| |||| ||| | ||| || | ||
Sbjct 775641 TCGATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGT 775582
Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538
| ||| ||||||||||||||||| | || || || |||||||| | ||| ||
Sbjct 775581 CTCTTGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGA 775522
Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC-CCGTATATC 66597
| | || ||||| | || ||||| || ||||| ||| ||| || | | ||||
Sbjct 775521 ATCAAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCT-GTACTTCTGATATT 775463
Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657
||||| | || ||| |||||||| || ||||| ||||| ||||| | || ||
Sbjct 775462 GTGAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGT 775403
Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717
| | || || || |||||||| |||| || | | |||| | || || | ||
Sbjct 775402 GTCGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTG 775343
Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777
|| | || || | || ||| | || || | |||||| || |||||| | |||
Sbjct 775342 TGGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGA 775283
Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA-GTGCAC 66836
||| ||||| || || || || | | || | | || || || |||| | |||
Sbjct 775282 CATCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCAC 775223
Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATC-CT-TGATATGCATTA 66890
| ||||||| | || || || || ||| | | |||| || || ||| || |
Sbjct 775222 A-CGCATCACCAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGA---GC---A 775170
Query 66891 AGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
||||||| | |||| ||||||| ||||||||| ||| ||||| ||
Sbjct 775169 AGTAGGATCTCTCCAATGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTC 775121
Score = 105 bits (116), Expect = 5e-18
Identities = 321/490 (66%), Gaps = 16/490 (3%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
|||||| ||||| || || ||| || || || | || || | |||||||| |||||
Sbjct 776977 ATCGACTGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGT 776918
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC-ATAATTCGG-C 65194
||| | ||| ||| | ||||| |||||||| | | ||| | || || || |
Sbjct 776917 CTTCAAGCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGGGGC 776858
Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254
|| | | ||| || ||||| || ||| || ||||||||| | ||||||| ||||||
Sbjct 776857 TCTG--ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGCC 776800
Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314
|| |||||||| | || || ||||| |||||||||||| | || | |||
Sbjct 776799 ATATCAATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTAC-----AAGTCCTTCA 776745
Query 65315 A-----TTGGAATCTCCTCAATGTCCTGGACTGAACC-ACGACGTGCAATAATGCGATTA 65368
| ||||||| | | || |||| ||||| | || | || ||| | ||
Sbjct 776744 ATTGCTTTGGAATGTTTGGCAAGTTTTGGATGGAACCGTTGTCG-GATATGATGTGGTTC 776686
Query 65369 CGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATG 65428
||| | || ||| | |||||| || | | || | | ||||| | || |
Sbjct 776685 TTCATTGCGTCATCCCAGATACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACA 776626
Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488
| ||||| || |||| || |||||||| ||||| || || ||| || |||||
Sbjct 776625 ATCTGGAATTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAA 776566
Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548
|||| ||| || | ||||| | ||||| ||||||||||| || || ||||| |
Sbjct 776565 CATTCGTTGTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGA 776506
Query 65549 GAGTTTCGCA 65558
||||||| ||
Sbjct 776505 GAGTTTCTCA 776496
>seq4
Length=1931745
Score = 131 bits (144), Expect = 1e-25
Identities = 183/257 (71%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
|||||| |||||||||||||| | ||| ||||| ||||| | |||||| | ||||| |
Sbjct 969395 CATAAACAGATCAGGTATCCACAAGGCATAGAACAGATCTCTTGCTCGCAGTTCCTCCTT 969336
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
|| || || || || | || ||||||||||||| || |||||||||||||||| |||
Sbjct 969335 CCCATGGTTCTTCCGAAGATCCAGGAACTCAAAGACATCAGCATGCCATGGTTCCAAGTA 969276
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519
|| || || | || | || |||||||| || || || | || ||||||
Sbjct 969275 TATTGCAAAGGCCCCTGGCCTCTTATTCCCACCTTGATCCACATACCTGGCTGTATTGTT 969216
Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579
|| || | |||||| || || | || || || ||||||| || || |||| |||
Sbjct 969215 AAACACTCTCAACATTGGAACTATTCCATTGGAAGTGCCATTTGTACCAGCGATATAGGA 969156
Query 66580 TCCTCGTGCCCGTATAT 66596
||| | |||| |||||
Sbjct 969155 TCCCTGGGCCCTTATAT 969139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567966082480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |