Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyberlindnera_20jadinii_20[genbank_20GCA_5F001245095.1_202015-07-26] 7 sequences; 12,707,304 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 192 5e-44 seq5 163 2e-35 seq4 131 1e-25 >seq6 Length=1261692 Score = 192 bits (212), Expect = 5e-44 Identities = 394/576 (68%), Gaps = 11/576 (2%) Strand=Plus/Plus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 ||||||||||| | ||||| || |||| | || ||||||| ||| || ||||| Sbjct 57915 CGTCGTTTCGTCCTCTTCCCTATTAAGTACCATGAGATTTGGCAAGCGTATAAGAAGGCT 57974 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 || |||||||||||||| | |||||| | ||||| || || || || | |||||| | Sbjct 57975 GAGGCTTCCTTCTGGACTGCCGAGGAGATTGATTTATCAAAGGATTTGCACGACTGGAAC 58034 Query 61171 CGTTTATCGAGCGGTGAACAA-CATTTCATTA----AACATGTGTTGGCGTTCTTTGCCG 61225 || || || |||| | | |||| | | || | ||| |||| || ||||||| Sbjct 58035 AACAGATTGAACGA-GAACGAGCGTTTCTTCATCTCAAGA-GTGCTGGCCTTTTTTGCCG 58092 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGC-GCAGGAGGTGCAAGTG 61284 |||| |||||||||||||| ||||| || | ||| ||| | ||| ||||| ||| | Sbjct 58093 CTTCTGACGGTATCGTCAACGAGAACTTGGTTGAAAACTTCTCTGCA-GAGGTTCAAATC 58151 Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344 | ||||| || ||||| || |||||||| |||||||| ||||||| |||| Sbjct 58152 CCAGAGGCTAAGTGCTTCTATGGGTTCCAGATCATGATGGAGAACATCCACTCTGAGACT 58211 Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404 ||| | | ||||| || ||||||| ||| | ||| ||| |||||||| Sbjct 58212 TACTCCTTGTTGATCGACACCTACATCAAGGACCCAAAGGAGGCTGAGTTCTTGTTCAAC 58271 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACC 61464 ||||| || || || || | ||| ||| || |||||||| || | ||||| || Sbjct 58272 GCCATTGAAACCATCCCATGTATCAAGAAGAAGGCTGATTGGGCTTTGAGATGGATTGCC 58331 Query 61465 -AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 | | || || ||||| || || | | || ||||| | || || ||| | || Sbjct 58332 GATGATGAC-GCCCTATTTGCAGAGAGACTCGTTGCTTTTGCTGCTGTTGAAGGTATCTT 58390 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 ||| || || || ||| | ||||||||||||||||| | || | ||||| ||| | Sbjct 58391 CTTCTCCGGTTCATTCGCCTCCATCTTTTGGTTGAAGAAGAGAGGTTTGATGCCAGGTTT 58450 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGG 61619 ||||||| || |||||||| | || ||||| || Sbjct 58451 GACCTTCTCTAACGAGTTGATTTGCCGTGACGAAGG 58486 >seq5 Length=1517892 Score = 163 bits (180), Expect = 2e-35 Identities = 614/949 (65%), Gaps = 22/949 (2%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 |||||||||| ||||| | ||| || ||||| | |||||| |||| | ||||||||| Sbjct 776058 GGAAGGGCAATGGATGCCAAGTTACAAACAGCAACCTCGTCTGGAGAAGAGTACTCGACA 775999 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 || || |||| || | || | ||| | ||||| |||| ||||| ||| Sbjct 775998 ATCTCACAACACAAGTTC--GAAGACTTGATGATACCCAAGTTCTTCTGATTGGACTTTT 775941 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 || || ||||| || || | |||| | || || || || ||| || | ||| | || Sbjct 775940 TGTTACAAGCATCTTTATAAAGCATGAATGGTGTACCAGTTTCAGTCTGTGCCTCCAAGA 775881 Query 66180 TGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCT-ACCTTTGCGTTCGTAA 66238 | || | ||| || | |||||||| || | | | || | ||||| ||||||| Sbjct 775880 TCGCATACCAGAGCTTTTGAGCCTTCACAGT-CTTTCTTCCTTTACCTTCTTGTTCGTAC 775822 Query 66239 TGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGT 66298 | | || | ||| || ||||| || | || | || | | | || | | Sbjct 775821 TTTGTATACAATGCTTCAAATTCATCACCATATGCATCAGCCAAGCCAGTAGCCTCATTT 775762 Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 ||| | | | | ||| ||||| | |||||| ||||| ||| || ||||| || ||| Sbjct 775761 GGAGAGAATAAAGTCCATTCACCGTTCTGTTCAACACGCTTCATGAACAGATCTGGAATC 775702 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || | ||| ||| | ||| || |||| ||| || | ||||| || || | | Sbjct 775701 CACAAGGCTGGGAACAAATCACGAGCTCTGATCTCTTCCTTACCGTGGTTCTTTCTGATA 775642 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATA 66478 |||| ||| |||||||| || || |||||||| |||| ||| | ||| || | || Sbjct 775641 TCGATGAAATCAAAGATATCCGCGTGCCATGGCTCCAAGTACAAGGCAAATGCACCTGGT 775582 Query 66479 CGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGT 66538 | ||| ||||||||||||||||| | || || || |||||||| | ||| || Sbjct 775581 CTCTTGTTACCACCTTGGTCGACGTATCTTGCAGTGTTATTAAAGACACGGACCATAGGA 775522 Query 66539 ACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC-CCGTATATC 66597 | | || ||||| | || ||||| || ||||| ||| ||| || | | |||| Sbjct 775521 ATCAAACCATTAGAGGTACCGTTGGTACCAGCGATGTAGGACCCT-GTACTTCTGATATT 775463 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657 ||||| | || ||| |||||||| || ||||| ||||| ||||| | || || Sbjct 775462 GTGAATGTGCAAACCGATACCACCAGCGGTCTTAGAGATCAAGGCACATTGCTTCAAGGT 775403 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | || || || |||||||| |||| || | | |||| | || || | || Sbjct 775402 GTCGTAGATACCTTCGATGGAGTCTTCCTTCATAGCAACGAGGAAACAAGAGGACATCTG 775343 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGA 66777 || | || || | || ||| | || || | |||||| || |||||| | ||| Sbjct 775342 TGGGCTTGGAGTACCAGCATTGAACAAAGTTGGAGAAGCGTGTGTGAAGTAACGTTCAGA 775283 Query 66778 CATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGA-GTGCAC 66836 ||| ||||| || || || || | | || | | || || || |||| | ||| Sbjct 775282 CATCAGGTTGTAAGTTTCAATCACGGACTTCATATCTCTACCGTGGATACCGATGGCCAC 775223 Query 66837 ATCGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATC-CT-TGATATGCATTA 66890 | ||||||| | || || || || ||| | | |||| || || ||| || | Sbjct 775222 A-CGCATCACCAAGTGCTGTGGACGCTCGGCAACTTTGCCGTTCACTCTGA---GC---A 775170 Query 66891 AGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 ||||||| | |||| ||||||| ||||||||| ||| ||||| || Sbjct 775169 AGTAGGATCTCTCCAATGTCTTGAAACCAAAGTAGTTGTAGTTGAAGTC 775121 Score = 105 bits (116), Expect = 5e-18 Identities = 321/490 (66%), Gaps = 16/490 (3%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 |||||| ||||| || || ||| || || || | || || | |||||||| ||||| Sbjct 776977 ATCGACTGTGAATTGAATAGCAGCAGATGCGGCTTGTGTTCTCAAGTAGTACATACCGGT 776918 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC-ATAATTCGG-C 65194 ||| | ||| ||| | ||||| |||||||| | | ||| | || || || | Sbjct 776917 CTTCAAGCCCTTCTTCCAGCCGTAGAAGTGCATCGACGTGAGTTTACCCATGGTTGGGGC 776858 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || | | ||| || ||||| || ||| || ||||||||| | ||||||| |||||| Sbjct 776857 TCTG--ATATGAATGTTCAAAGATTGAGATTGGTCGATGTAAGCAGCACGATCGGCAGCC 776800 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 || |||||||| | || || ||||| |||||||||||| | || | ||| Sbjct 776799 ATATCAATGATGGTCTTTTGAGAGATTTCCCATACGGTCTTGTAC-----AAGTCCTTCA 776745 Query 65315 A-----TTGGAATCTCCTCAATGTCCTGGACTGAACC-ACGACGTGCAATAATGCGATTA 65368 | ||||||| | | || |||| ||||| | || | || ||| | || Sbjct 776744 ATTGCTTTGGAATGTTTGGCAAGTTTTGGATGGAACCGTTGTCG-GATATGATGTGGTTC 776686 Query 65369 CGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATG 65428 ||| | || ||| | |||||| || | | || | | ||||| | || | Sbjct 776685 TTCATTGCGTCATCCCAGATACCCAAGTCAACCAAATCACGCAGCAAGTATGGGTTCACA 776626 Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 | ||||| || |||| || |||||||| ||||| || || ||| || ||||| Sbjct 776625 ATCTGGAATTCACCGGCAAGAACACGACGAGAGTAGATATTAGAAGTGTATGGCTCAAAA 776566 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 |||| ||| || | ||||| | ||||| ||||||||||| || || ||||| | Sbjct 776565 CATTCGTTGTAACCCAAGATTTGAGATGTAGAGGCAGTTGGCATTGGTGCAACCAAAAGA 776506 Query 65549 GAGTTTCGCA 65558 ||||||| || Sbjct 776505 GAGTTTCTCA 776496 >seq4 Length=1931745 Score = 131 bits (144), Expect = 1e-25 Identities = 183/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| |||||||||||||| | ||| ||||| ||||| | |||||| | ||||| | Sbjct 969395 CATAAACAGATCAGGTATCCACAAGGCATAGAACAGATCTCTTGCTCGCAGTTCCTCCTT 969336 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || || || || || | || ||||||||||||| || |||||||||||||||| ||| Sbjct 969335 CCCATGGTTCTTCCGAAGATCCAGGAACTCAAAGACATCAGCATGCCATGGTTCCAAGTA 969276 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTT 66519 || || || | || | || |||||||| || || || | || |||||| Sbjct 969275 TATTGCAAAGGCCCCTGGCCTCTTATTCCCACCTTGATCCACATACCTGGCTGTATTGTT 969216 Query 66520 GAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGA 66579 || || | |||||| || || | || || || ||||||| || || |||| ||| Sbjct 969215 AAACACTCTCAACATTGGAACTATTCCATTGGAAGTGCCATTTGTACCAGCGATATAGGA 969156 Query 66580 TCCTCGTGCCCGTATAT 66596 ||| | |||| ||||| Sbjct 969155 TCCCTGGGCCCTTATAT 969139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567966082480