Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq381 194 9e-48 seq275 194 9e-48 seq278 192 3e-47 seq361 179 2e-43 seq489 172 3e-41 seq357 71.6 8e-11 >seq381 Length=820 Score = 194 bits (214), Expect = 9e-48 Identities = 114/117 (97%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 386 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAG-TAACATCGCCC 328 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 327 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 271 >seq275 Length=7890 Score = 194 bits (214), Expect = 9e-48 Identities = 113/117 (97%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 7494 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAAGTAACATCGCCC 7553 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 7554 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 7610 >seq278 Length=3014 Score = 192 bits (212), Expect = 3e-47 Identities = 114/118 (97%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGA-TAACATCGCC 59 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 421 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAAAGTAACATCGCC 480 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 481 CGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 538 >seq361 Length=807 Score = 179 bits (198), Expect = 2e-43 Identities = 111/116 (96%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 4 CCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGA-TAACATCGCCCGA 62 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 742 CCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAAAGTAACATCGCCCGA 683 Query 63 TCCCTAGT-CGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 682 TCCCTAGTTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 627 >seq489 Length=619 Score = 172 bits (190), Expect = 3e-41 Identities = 111/119 (93%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCG-CC 59 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 349 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAAGTAACATCGACC 408 Query 60 CG-ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 409 CGAATCCCTAGCTGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 467 >seq357 Length=2118 Score = 71.6 bits (78), Expect = 8e-11 Identities = 43/44 (98%), Gaps = 1/44 (2%) Strand=Plus/Minus Query 4 CCCAAAGA-CTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAA 46 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 45 CCCAAAGAACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278398538400