Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq278 522 5e-146
seq361 513 3e-143
seq275 462 4e-128
seq381 444 1e-122
seq492 338 1e-90
seq489 250 5e-64
seq525 100 5e-19
>seq278
Length=3014
Score = 522 bits (578), Expect = 5e-146
Identities = 304/314 (97%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 853 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 794
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 793 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 734
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 733 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 674
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 673 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 614
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 613 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 554
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 553 ACGAAAGTTAGGGG 540
>seq361
Length=807
Score = 513 bits (568), Expect = 3e-143
Identities = 303/314 (96%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||
Sbjct 313 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCC-TTCACTGGGTGTGTCGGGGA 371
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 372 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 431
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 432 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 491
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 492 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 551
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 552 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 611
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 612 ACGAAAGTTAGGGG 625
>seq275
Length=7890
Score = 462 bits (512), Expect = 4e-128
Identities = 270/279 (97%), Gaps = 0/279 (0%)
Strand=Plus/Minus
Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 7890 TGCCCTTCACTGGGTGTGTCGGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 7831
Query 100 AAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTA 159
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 7830 AAAGCAGGCCTATGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTA 7771
Query 160 TTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATT 219
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 7770 TTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATT 7711
Query 220 CAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCAC 279
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 7710 CAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGC 7651
Query 280 CAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||||||||||||||||||||||||||||
Sbjct 7650 CAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 7612
>seq381
Length=820
Score = 444 bits (492), Expect = 1e-122
Identities = 260/269 (97%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 50 TGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC 109
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TGGGTGTGTCGGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC 60
Query 110 TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT 169
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 61 TATGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGT 120
Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAG 229
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 121 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAG 180
Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 181 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTT 240
Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||||||||||||||||||
Sbjct 241 TTCATTAATCAGTGAACGAAAGTTAGGGG 269
>seq492
Length=513
Score = 338 bits (374), Expect = 1e-90
Identities = 195/200 (98%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 200 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 141
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 140 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 81
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 80 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 21
Query 185 AATGATTAATAGGGATAGTC 204
||||||||||||||||||||
Sbjct 20 AATGATTAATAGGGATAGTC 1
>seq489
Length=619
Score = 250 bits (276), Expect = 5e-64
Identities = 146/151 (97%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 168 GTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTC 227
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 619 GTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTC 560
Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 559 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATG 500
Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||||||||||||||||||||||||||
Sbjct 499 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 469
>seq525
Length=994
Score = 100 bits (110), Expect = 5e-19
Identities = 58/60 (97%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 60 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915194874880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |