Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq278 522 5e-146 seq361 513 3e-143 seq275 462 4e-128 seq381 444 1e-122 seq492 338 1e-90 seq489 250 5e-64 seq525 100 5e-19 >seq278 Length=3014 Score = 522 bits (578), Expect = 5e-146 Identities = 304/314 (97%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 853 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 794 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 793 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 734 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 733 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 674 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 673 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 614 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 613 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 554 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 553 ACGAAAGTTAGGGG 540 >seq361 Length=807 Score = 513 bits (568), Expect = 3e-143 Identities = 303/314 (96%), Gaps = 1/314 (0%) Strand=Plus/Plus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| Sbjct 313 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCC-TTCACTGGGTGTGTCGGGGA 371 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 372 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 431 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 432 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 491 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 492 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 551 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 552 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 611 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 612 ACGAAAGTTAGGGG 625 >seq275 Length=7890 Score = 462 bits (512), Expect = 4e-128 Identities = 270/279 (97%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 7890 TGCCCTTCACTGGGTGTGTCGGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 7831 Query 100 AAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTA 159 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 7830 AAAGCAGGCCTATGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTA 7771 Query 160 TTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATT 219 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 7770 TTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATT 7711 Query 220 CAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCAC 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 7710 CAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGC 7651 Query 280 CAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||||||||||||||||||||||||||||| Sbjct 7650 CAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 7612 >seq381 Length=820 Score = 444 bits (492), Expect = 1e-122 Identities = 260/269 (97%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 50 TGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC 109 |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TGGGTGTGTCGGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC 60 Query 110 TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT 169 | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 61 TATGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGT 120 Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAG 229 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 121 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAG 180 Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 181 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTT 240 Query 290 TTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||||||||||||||||||| Sbjct 241 TTCATTAATCAGTGAACGAAAGTTAGGGG 269 >seq492 Length=513 Score = 338 bits (374), Expect = 1e-90 Identities = 195/200 (98%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 200 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 141 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 140 ACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 81 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 80 TAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 21 Query 185 AATGATTAATAGGGATAGTC 204 |||||||||||||||||||| Sbjct 20 AATGATTAATAGGGATAGTC 1 >seq489 Length=619 Score = 250 bits (276), Expect = 5e-64 Identities = 146/151 (97%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 168 GTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTC 227 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 619 GTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTC 560 Query 228 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATG 287 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 559 AGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATG 500 Query 288 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||||||||||||||||||||||||| Sbjct 499 TTTTCATTAATCAGTGAACGAAAGTTAGGGG 469 >seq525 Length=994 Score = 100 bits (110), Expect = 5e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 60 TGGTCCGGCCGGGCCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGTCGGGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915194874880