Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq312 953 0.0 seq275 953 0.0 seq357 906 0.0 seq515 645 0.0 seq406 435 1e-119 seq108 428 2e-117 >seq312 Length=1796 Score = 953 bits (1056), Expect = 0.0 Identities = 626/686 (91%), Gaps = 4/686 (1%) Strand=Plus/Plus Query 1 TACGTGACCGGTGGCCTA-GC-CGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAA 58 |||||| | || |||||| || | |||||||||| ||||||||||||||||||||||||| Sbjct 152 TACGTGGCTGGAGGCCTACGCTCATGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAA 211 Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 212 TGCAGCTCTAAATGGGTGGTAAATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAG 271 Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 272 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAATAGTACGT 331 Query 179 GAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC- 237 |||||||||||||||||||| ||||||||||||||||| || ||| ||| | || Sbjct 332 GAAATTGTTGAAAGGGAAGCTCTTGCAACCAGACTTGCGCGTCGTTAATCATCTGGTGTT 391 Query 238 CTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297 ||| ||||||| || | || ||||||||||||||| | || ||| |||||||||| Sbjct 392 CTCA-CCGGTGCGCTTGGCGACGCTCAGGCCAGCATCAGTTTTGGTGGTTGGATAAAGGC 450 Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357 || ||||||||||| | || ||||| |||||||||||| ||||| ||||| ||| || Sbjct 451 CCTGGGAATGTGGCTCTCTCCGGGGAGTGTTATAGCCCAGGGTGCAATGCAGCCTACCGA 510 Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 511 GACTGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGA 570 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 571 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTA 630 Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537 ||||||||||||||||||| || ||| | |||||||| |||||||||||||||||||||| Sbjct 631 ATGAAAGTGAACGGAGGTGAGAGCCCTTAAGGGTGCATCATCGACCGATCCTGATGTCTT 690 Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 691 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 750 Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 751 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 810 Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||||| Sbjct 811 ATCGTCAAATTTGGGTATAGGGGCGA 836 >seq275 Length=7890 Score = 953 bits (1056), Expect = 0.0 Identities = 626/686 (91%), Gaps = 4/686 (1%) Strand=Plus/Minus Query 1 TACGTGACCGGTGGCCTA-GC-CGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAA 58 |||||| | || |||||| || | |||||||||| ||||||||||||||||||||||||| Sbjct 6092 TACGTGGCTGGAGGCCTACGCTCATGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAA 6033 Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 6032 TGCAGCTCTAAATGGGTGGTAAATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAG 5973 Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 5972 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAATAGTACGT 5913 Query 179 GAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC- 237 |||||||||||||||||||| ||||||||||||||||| || ||| ||| | || Sbjct 5912 GAAATTGTTGAAAGGGAAGCTCTTGCAACCAGACTTGCGCGTCGTTAATCATCTGGTGTT 5853 Query 238 CTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297 ||| ||||||| || | || ||||||||||||||| | || ||| |||||||||| Sbjct 5852 CTCA-CCGGTGCGCTTGGCGACGCTCAGGCCAGCATCAGTTTTGGTGGTTGGATAAAGGC 5794 Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357 || ||||||||||| | || ||||| |||||||||||| ||||| ||||| ||| || Sbjct 5793 CCTGGGAATGTGGCTCTCTCCGGGGAGTGTTATAGCCCAGGGTGCAATGCAGCCTACCGA 5734 Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 5733 GACTGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGA 5674 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 5673 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTA 5614 Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537 ||||||||||||||||||| || ||| | |||||||| |||||||||||||||||||||| Sbjct 5613 ATGAAAGTGAACGGAGGTGAGAGCCCTTAAGGGTGCATCATCGACCGATCCTGATGTCTT 5554 Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5553 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 5494 Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 5493 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 5434 Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||||| Sbjct 5433 ATCGTCAAATTTGGGTATAGGGGCGA 5408 >seq357 Length=2118 Score = 906 bits (1004), Expect = 0.0 Identities = 604/665 (91%), Gaps = 5/665 (1%) Strand=Plus/Plus Query 1 TACGTGACCGGTGGCCTA-GC-CGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAA 58 |||||| | || |||||| || | |||||||||| ||||||||||||||||||||||||| Sbjct 1453 TACGTGGCTGGAGGCCTACGCTCATGTGAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAA 1512 Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 1513 TGCAGCTCTAAATGGGTGGTAAATTTCATCTAAAGCTAAATATTGGCCAGAGACCGATAG 1572 Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 1573 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAATAGTACGT 1632 Query 179 GAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC- 237 |||||||||||||||||||| ||||||||||||||||| || ||| ||| | || Sbjct 1633 GAAATTGTTGAAAGGGAAGCTCTTGCAACCAGACTTGCGCGTCGTTAATCATCTGGTGTT 1692 Query 238 CTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297 ||| ||||||| || | || ||||||||||||||| | || ||| |||||||||| Sbjct 1693 CTCA-CCGGTGCGCTTGGCGACGCTCAGGCCAGCATCAGTTTTGGTGGTTGGATAAAGGC 1751 Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357 || ||||||||||| | || ||||| |||||||||||| ||||| ||||| ||| || Sbjct 1752 CCTGGGAATGTGGCTCTCTCCGGGGAGTGTTATAGCCCAGGGTGCAATGCAGCCTACCGA 1811 Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 |||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 1812 GACTGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGA 1871 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1872 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTA 1931 Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537 ||||||||||||||||||| || ||| | |||||||| |||||||||||||||||||||| Sbjct 1932 ATGAAAGTGAACGGAGGTGAGAGCCCTTAAGGGTGCATCATCGACCGATCCTGATGTCTT 1991 Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1992 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 2051 Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATC- 656 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2052 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 2111 Query 657 GATCG 661 ||||| Sbjct 2112 GATCG 2116 >seq515 Length=557 Score = 645 bits (714), Expect = 0.0 Identities = 449/503 (89%), Gaps = 7/503 (1%) Strand=Plus/Minus Query 183 TTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCG 241 |||||||||||||||| ||||||||||||||||| || ||| ||| | || ||| Sbjct 557 TTGTTGAAAGGGAAGCTCTTGCAACCAGACTTGCGCGTCGTTAATCATCTGGTGTTCTCA 498 Query 242 GCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCG 301 ||||||| || | || ||||||||||||||| | || ||| ||| |||||| | Sbjct 497 -CCGGTGCGCTTGGCGACGCTCAGGCCAGCATCAGTTTGGT-GGTTGGA--AAGGCCT-G 443 Query 302 GGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACT 361 |||||||||| | || ||||| |||||||||||| ||||| ||||| ||| || |||| Sbjct 442 GGAATGTGGCTCTCTCCGGGGAGTGTTATAGCCCAGGGTGCAATGCAGCCTACCGAGACT 383 Query 362 GAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACA 421 |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 382 GAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACA 323 Query 422 CGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGA 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 322 CGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTAATGA 263 Query 482 AAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGA 541 ||||||||||||||| || ||| | |||||||| |||||||||||||||||||||||||| Sbjct 262 AAGTGAACGGAGGTGAGAGCCCTTAAGGGTGCATCATCGACCGATCCTGATGTCTTCGGA 203 Query 542 TGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAG 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 202 TGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAG 143 Query 602 GGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAA-TCGATC 660 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 142 GGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATTCGATC 83 Query 661 GTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||| Sbjct 82 GKCAAATTTGGGTATAGGGGCGA 60 >seq406 Length=773 Score = 435 bits (482), Expect = 1e-119 Identities = 252/259 (97%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 425 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 256 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTAATGAAAG 315 Query 485 TGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGG 544 |||||||||||| || ||| | |||||||| ||||||||||||||||||||||||||||| Sbjct 316 TGAACGGAGGTGAGAGCCCTTAAGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGG 375 Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 376 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 435 Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 436 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCA 495 Query 665 AATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| Sbjct 496 AATTTGGGTATAGGGGCGA 514 >seq108 Length=211332 Score = 428 bits (474), Expect = 2e-117 Identities = 251/259 (97%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 425 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 315 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGTAATGAAAG 256 Query 485 TGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGG 544 |||||||||||| || || | |||||||| ||||||||||||||||||||||||||||| Sbjct 255 TGAACGGAGGTGAGAGCCT-TAAGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGG 197 Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 196 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 137 Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 136 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCA 77 Query 665 AATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| Sbjct 76 AATTTGGGTATAGGGGCGA 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079987988000