Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq510 73.4 5e-11
seq491 73.4 5e-11
seq486 73.4 5e-11
seq468 73.4 5e-11
seq409 73.4 5e-11
seq359 73.4 5e-11
seq358 73.4 5e-11
seq249 73.4 5e-11
seq244 73.4 5e-11
>seq510
Length=679
Score = 73.4 bits (80), Expect = 5e-11
Identities = 69/87 (79%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||
Sbjct 318 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 377
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 378 CTCAAACGCCTTCGTATTCTCTACTTG 404
>seq491
Length=950
Score = 73.4 bits (80), Expect = 5e-11
Identities = 69/87 (79%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||
Sbjct 353 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 412
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 413 CTCAAACGCCTTCGTATTCTCTACTTG 439
>seq486
Length=1304
Score = 73.4 bits (80), Expect = 5e-11
Identities = 69/87 (79%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||
Sbjct 1065 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 1006
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 1005 CTCAAACGCCTTCGTATTCTCTACTTG 979
>seq468
Length=1331
Score = 73.4 bits (80), Expect = 5e-11
Identities = 69/87 (79%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||
Sbjct 590 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 649
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 650 CTCAAACGCCTTCGTATTCTCTACTTG 676
>seq409
Length=872
Score = 73.4 bits (80), Expect = 5e-11
Identities = 69/87 (79%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||
Sbjct 566 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 625
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 626 CTCAAACGCCTTCGTATTCTCTACTTG 652
>seq359
Length=1320
Score = 73.4 bits (80), Expect = 5e-11
Identities = 69/87 (79%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||
Sbjct 88 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 29
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 28 CTCAAACGCCTTCGTATTCTCTACTTG 2
>seq358
Length=1523
Score = 73.4 bits (80), Expect = 5e-11
Identities = 69/87 (79%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||
Sbjct 505 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 564
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 565 CTCAAACGCCTTCGTATTCTCTACTTG 591
>seq249
Length=2736
Score = 73.4 bits (80), Expect = 5e-11
Identities = 69/87 (79%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||
Sbjct 1160 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 1219
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 1220 CTCAAACGCCTTCGTATTCTCTACTTG 1246
>seq244
Length=5574
Score = 73.4 bits (80), Expect = 5e-11
Identities = 69/87 (79%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||
Sbjct 183 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 242
Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225
| | |||||||| ||||||||||| ||
Sbjct 243 CTCAAACGCCTTCGTATTCTCTACTTG 269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694396232880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |