Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq510 73.4 5e-11 seq491 73.4 5e-11 seq486 73.4 5e-11 seq468 73.4 5e-11 seq409 73.4 5e-11 seq359 73.4 5e-11 seq358 73.4 5e-11 seq249 73.4 5e-11 seq244 73.4 5e-11 >seq510 Length=679 Score = 73.4 bits (80), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | |||| Sbjct 318 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 377 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 378 CTCAAACGCCTTCGTATTCTCTACTTG 404 >seq491 Length=950 Score = 73.4 bits (80), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | |||| Sbjct 353 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 412 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 413 CTCAAACGCCTTCGTATTCTCTACTTG 439 >seq486 Length=1304 Score = 73.4 bits (80), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | |||| Sbjct 1065 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 1006 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 1005 CTCAAACGCCTTCGTATTCTCTACTTG 979 >seq468 Length=1331 Score = 73.4 bits (80), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | |||| Sbjct 590 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 649 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 650 CTCAAACGCCTTCGTATTCTCTACTTG 676 >seq409 Length=872 Score = 73.4 bits (80), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | |||| Sbjct 566 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 625 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 626 CTCAAACGCCTTCGTATTCTCTACTTG 652 >seq359 Length=1320 Score = 73.4 bits (80), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | |||| Sbjct 88 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 29 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 28 CTCAAACGCCTTCGTATTCTCTACTTG 2 >seq358 Length=1523 Score = 73.4 bits (80), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | |||| Sbjct 505 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 564 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 565 CTCAAACGCCTTCGTATTCTCTACTTG 591 >seq249 Length=2736 Score = 73.4 bits (80), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | |||| Sbjct 1160 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 1219 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 1220 CTCAAACGCCTTCGTATTCTCTACTTG 1246 >seq244 Length=5574 Score = 73.4 bits (80), Expect = 5e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | |||| Sbjct 183 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCG 242 Query 199 CCCGAACGCCTTAGTATTCTCTACCTG 225 | | |||||||| ||||||||||| || Sbjct 243 CTCAAACGCCTTCGTATTCTCTACTTG 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694396232880