Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq502 95.1 4e-17
seq456 95.1 4e-17
seq382 95.1 4e-17
seq286 95.1 4e-17
seq273 95.1 4e-17
seq244 95.1 4e-17
seq243 95.1 4e-17
>seq502
Length=1018
Score = 95.1 bits (104), Expect = 4e-17
Identities = 131/182 (72%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || | || | ||||||| | |||||| ||| | ||||||||
Sbjct 677 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 736
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| |||||| | || | |||| |||| | |||||| | | | |||||||||||
Sbjct 737 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 795
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||
Sbjct 796 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 855
Query 486 AT 487
||
Sbjct 856 AT 857
>seq456
Length=631
Score = 95.1 bits (104), Expect = 4e-17
Identities = 131/182 (72%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || | || | ||||||| | |||||| ||| | ||||||||
Sbjct 29 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 88
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| |||||| | || | |||| |||| | |||||| | | | |||||||||||
Sbjct 89 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 147
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||
Sbjct 148 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 207
Query 486 AT 487
||
Sbjct 208 AT 209
>seq382
Length=1051
Score = 95.1 bits (104), Expect = 4e-17
Identities = 131/182 (72%), Gaps = 1/182 (1%)
Strand=Plus/Minus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || | || | ||||||| | |||||| ||| | ||||||||
Sbjct 425 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 366
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| |||||| | || | |||| |||| | |||||| | | | |||||||||||
Sbjct 365 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 307
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||
Sbjct 306 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 247
Query 486 AT 487
||
Sbjct 246 AT 245
>seq286
Length=3561
Score = 95.1 bits (104), Expect = 4e-17
Identities = 131/182 (72%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || | || | ||||||| | |||||| ||| | ||||||||
Sbjct 2326 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 2385
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| |||||| | || | |||| |||| | |||||| | | | |||||||||||
Sbjct 2386 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 2444
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||
Sbjct 2445 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 2504
Query 486 AT 487
||
Sbjct 2505 AT 2506
>seq273
Length=1002
Score = 95.1 bits (104), Expect = 4e-17
Identities = 131/182 (72%), Gaps = 1/182 (1%)
Strand=Plus/Minus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || | || | ||||||| | |||||| ||| | ||||||||
Sbjct 281 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 222
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| |||||| | || | |||| |||| | |||||| | | | |||||||||||
Sbjct 221 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 163
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||
Sbjct 162 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 103
Query 486 AT 487
||
Sbjct 102 AT 101
>seq244
Length=5574
Score = 95.1 bits (104), Expect = 4e-17
Identities = 131/182 (72%), Gaps = 1/182 (1%)
Strand=Plus/Minus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || | || | ||||||| | |||||| ||| | ||||||||
Sbjct 5252 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 5193
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| |||||| | || | |||| |||| | |||||| | | | |||||||||||
Sbjct 5192 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 5134
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||
Sbjct 5133 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 5074
Query 486 AT 487
||
Sbjct 5073 AT 5072
>seq243
Length=1323
Score = 95.1 bits (104), Expect = 4e-17
Identities = 131/182 (72%), Gaps = 1/182 (1%)
Strand=Plus/Minus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || | || | ||||||| | |||||| ||| | ||||||||
Sbjct 911 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 852
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| |||||| | || | |||| |||| | |||||| | | | |||||||||||
Sbjct 851 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 793
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| |||||||||| ||||| ||||| ||||||||||| |||| || | ||||||
Sbjct 792 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 733
Query 486 AT 487
||
Sbjct 732 AT 731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503991577600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |