Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq502 95.1 4e-17 seq456 95.1 4e-17 seq382 95.1 4e-17 seq286 95.1 4e-17 seq273 95.1 4e-17 seq244 95.1 4e-17 seq243 95.1 4e-17 >seq502 Length=1018 Score = 95.1 bits (104), Expect = 4e-17 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | |||||||| Sbjct 677 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 736 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||||| | || | |||| |||| | |||||| | | | ||||||||||| Sbjct 737 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 795 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || |||||||||| ||||| ||||| ||||||||||| |||| || | |||||| Sbjct 796 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 855 Query 486 AT 487 || Sbjct 856 AT 857 >seq456 Length=631 Score = 95.1 bits (104), Expect = 4e-17 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | |||||||| Sbjct 29 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 88 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||||| | || | |||| |||| | |||||| | | | ||||||||||| Sbjct 89 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 147 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || |||||||||| ||||| ||||| ||||||||||| |||| || | |||||| Sbjct 148 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 207 Query 486 AT 487 || Sbjct 208 AT 209 >seq382 Length=1051 Score = 95.1 bits (104), Expect = 4e-17 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | |||||||| Sbjct 425 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 366 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||||| | || | |||| |||| | |||||| | | | ||||||||||| Sbjct 365 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 307 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || |||||||||| ||||| ||||| ||||||||||| |||| || | |||||| Sbjct 306 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 247 Query 486 AT 487 || Sbjct 246 AT 245 >seq286 Length=3561 Score = 95.1 bits (104), Expect = 4e-17 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | |||||||| Sbjct 2326 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 2385 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||||| | || | |||| |||| | |||||| | | | ||||||||||| Sbjct 2386 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 2444 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || |||||||||| ||||| ||||| ||||||||||| |||| || | |||||| Sbjct 2445 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 2504 Query 486 AT 487 || Sbjct 2505 AT 2506 >seq273 Length=1002 Score = 95.1 bits (104), Expect = 4e-17 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | |||||||| Sbjct 281 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 222 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||||| | || | |||| |||| | |||||| | | | ||||||||||| Sbjct 221 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 163 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || |||||||||| ||||| ||||| ||||||||||| |||| || | |||||| Sbjct 162 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 103 Query 486 AT 487 || Sbjct 102 AT 101 >seq244 Length=5574 Score = 95.1 bits (104), Expect = 4e-17 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | |||||||| Sbjct 5252 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 5193 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||||| | || | |||| |||| | |||||| | | | ||||||||||| Sbjct 5192 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 5134 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || |||||||||| ||||| ||||| ||||||||||| |||| || | |||||| Sbjct 5133 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 5074 Query 486 AT 487 || Sbjct 5073 AT 5072 >seq243 Length=1323 Score = 95.1 bits (104), Expect = 4e-17 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | |||||||| Sbjct 911 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATTTCTATACAAAGA 852 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||||| | || | |||| |||| | |||||| | | | ||||||||||| Sbjct 851 GATGCGAAAATGTGAATTTAAGCTAATCTC-TAAAGTAGAATATAATAAGGATTGTAGTC 793 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || |||||||||| ||||| ||||| ||||||||||| |||| || | |||||| Sbjct 792 TGAAACTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCACGTCACGGTGG 733 Query 486 AT 487 || Sbjct 732 AT 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503991577600