Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq381 356 4e-96 seq278 356 4e-96 seq275 356 4e-96 seq357 351 2e-94 seq489 300 3e-79 >seq381 Length=820 Score = 356 bits (394), Expect = 4e-96 Identities = 234/257 (91%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 770 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 711 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 710 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 652 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || |||||||||| |||||||||||||||||||||||| |||||| Sbjct 651 ACCAGCCAAAGCTAGCCTGGCTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 592 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 591 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 532 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 531 AGAGCTCTCAATCTGTC 515 >seq278 Length=3014 Score = 356 bits (394), Expect = 4e-96 Identities = 234/257 (91%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 37 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 96 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 97 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 155 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || |||||||||| |||||||||||||||||||||||| |||||| Sbjct 156 ACCAGCCAAAGCTAGCCTGGCTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 215 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 216 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 275 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 276 AGAGCTCTCAATCTGTC 292 >seq275 Length=7890 Score = 356 bits (394), Expect = 4e-96 Identities = 234/257 (91%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7110 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 7169 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 7170 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 7228 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || |||||||||| |||||||||||||||||||||||| |||||| Sbjct 7229 ACCAGCCAAAGCTAGCCTGGCTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 7288 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 7289 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 7348 Query 242 AGAGCTATCAATCTGTC 258 |||||| |||||||||| Sbjct 7349 AGAGCTCTCAATCTGTC 7365 >seq357 Length=2118 Score = 351 bits (388), Expect = 2e-94 Identities = 234/258 (91%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 435 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 376 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| || Sbjct 375 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 317 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 |||| ||| || |||||||||| |||||||||||||||||||||||| |||||| Sbjct 316 ACCAGCCAAAGCTAGCCTGGCTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 257 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG-A 240 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | Sbjct 256 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 197 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 196 AAGAGCTCTCAATCTGTC 179 >seq489 Length=619 Score = 300 bits (332), Expect = 3e-79 Identities = 200/221 (90%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 38 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCC 97 |||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| Sbjct 1 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCC 59 Query 98 AATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAA 157 ||||||||||||||||||| || |||| ||| || |||||||||| ||||||| Sbjct 60 GATAGTCCCTCTAAGAAGCCGGCGACCAGCCAAAGCTAGCCTGGCTATTTAGTAGGTTAA 119 Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 120 GGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATG 179 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||| | ||||||||||||||| |||||||||| Sbjct 180 CACCACCACCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796795677360