Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq357 100 2e-19 seq275 100 2e-19 >seq357 Length=2118 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 629 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 573 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||| || ||||||||||| Sbjct 572 GGCAGGGACGT-ATTCAACGCAAGCT 548 >seq275 Length=7890 Score = 100 bits (110), Expect = 2e-19 Identities = 77/86 (90%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||| ||||||| || ||||||||| ||||||||||| |||||||||| Sbjct 6916 TCCGAAAGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 6972 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 ||||||||||| || ||||||||||| Sbjct 6973 GGCAGGGACGT-ATTCAACGCAAGCT 6997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300798420800