Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq361 192 7e-47
seq492 185 1e-44
seq278 185 1e-44
seq275 174 2e-41
seq381 170 2e-40
>seq361
Length=807
Score = 192 bits (212), Expect = 7e-47
Identities = 160/192 (83%), Gaps = 3/192 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 482 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 423
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 422 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 363
Query 126 CA-CCAATGAAGGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| ||||||||| | ||||| ||| ||| ||| | || |||| | |||
Sbjct 362 CACCCAGTGAAGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTGCACGCG 304
Query 184 GTGAGGCGGACC 195
||||||||||||
Sbjct 303 GTGAGGCGGACC 292
>seq492
Length=513
Score = 185 bits (204), Expect = 1e-44
Identities = 160/193 (83%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 30 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 89
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 90 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 149
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182
|| ||| |||| ||||| | ||||| ||| ||| ||| | || |||| | |||
Sbjct 150 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTGCACGC 208
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 209 GGTGAGGCGGACC 221
>seq278
Length=3014
Score = 185 bits (204), Expect = 1e-44
Identities = 160/193 (83%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 683 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 742
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 743 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 802
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182
|| ||| |||| ||||| | ||||| ||| ||| ||| | || |||| | |||
Sbjct 803 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTGCACGC 861
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 862 GGTGAGGCGGACC 874
>seq275
Length=7890
Score = 174 bits (192), Expect = 2e-41
Identities = 119/133 (89%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 7755 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 7814
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 7815 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 7874
Query 126 CA-CCAATGAAGG 137
|| ||| ||||||
Sbjct 7875 CACCCAGTGAAGG 7887
>seq381
Length=820
Score = 170 bits (188), Expect = 2e-40
Identities = 112/124 (90%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 126 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 67
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 66 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 7
Query 126 CACC 129
||||
Sbjct 6 CACC 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595196771040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |