Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq273 86.0 2e-14
seq502 84.2 5e-14
seq469 84.2 5e-14
seq382 84.2 5e-14
seq363 84.2 5e-14
seq288 84.2 5e-14
seq286 84.2 5e-14
seq258 84.2 5e-14
seq242 84.2 5e-14
seq536 82.4 2e-13
seq524 82.4 2e-13
seq243 73.4 1e-10
>seq273
Length=1002
Score = 86.0 bits (94), Expect = 2e-14
Identities = 211/317 (67%), Gaps = 31/317 (10%)
Strand=Plus/Minus
Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83
|| ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | ||
Sbjct 898 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 839
Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143
|||||||| | ||| ||| | | |||| | | ||| || |||
Sbjct 838 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 793
Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203
|||| ||| || | || | | |||||| | ||| ||| || ||||
Sbjct 792 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 749
Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTG-T 262
| |||||| ||| |||| || || || | ||||||||||| | | | || |
Sbjct 748 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTTATCTAAT 689
Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322
||||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 688 AACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCA 629
Query 323 CGCCGTAAACGATGAAT 339
|| | || ||||||
Sbjct 628 AGCAGATAATTATGAAT 612
>seq502
Length=1018
Score = 84.2 bits (92), Expect = 5e-14
Identities = 209/316 (66%), Gaps = 30/316 (9%)
Strand=Plus/Plus
Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83
|| ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | ||
Sbjct 62 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 121
Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143
|||||||| | ||| ||| | | |||| | | ||| || |||
Sbjct 122 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 167
Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203
|||| ||| || | || | | |||||| | ||| ||| || ||||
Sbjct 168 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 211
Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263
| |||||| ||| |||| || || || | ||||||||||| | | | ||
Sbjct 212 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 271
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323
|||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 272 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 331
Query 324 GCCGTAAACGATGAAT 339
|| | || ||||||
Sbjct 332 GCAGATAATTATGAAT 347
>seq469
Length=871
Score = 84.2 bits (92), Expect = 5e-14
Identities = 209/316 (66%), Gaps = 30/316 (9%)
Strand=Plus/Plus
Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83
|| ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | ||
Sbjct 274 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 333
Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143
|||||||| | ||| ||| | | |||| | | ||| || |||
Sbjct 334 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 379
Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203
|||| ||| || | || | | |||||| | ||| ||| || ||||
Sbjct 380 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 423
Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263
| |||||| ||| |||| || || || | ||||||||||| | | | ||
Sbjct 424 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 483
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323
|||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 484 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 543
Query 324 GCCGTAAACGATGAAT 339
|| | || ||||||
Sbjct 544 GCAGATAATTATGAAT 559
>seq382
Length=1051
Score = 84.2 bits (92), Expect = 5e-14
Identities = 209/316 (66%), Gaps = 30/316 (9%)
Strand=Plus/Minus
Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83
|| ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | ||
Sbjct 1042 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 983
Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143
|||||||| | ||| ||| | | |||| | | ||| || |||
Sbjct 982 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 937
Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203
|||| ||| || | || | | |||||| | ||| ||| || ||||
Sbjct 936 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 893
Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263
| |||||| ||| |||| || || || | ||||||||||| | | | ||
Sbjct 892 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 833
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323
|||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 832 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 773
Query 324 GCCGTAAACGATGAAT 339
|| | || ||||||
Sbjct 772 GCAGATAATTATGAAT 757
>seq363
Length=853
Score = 84.2 bits (92), Expect = 5e-14
Identities = 209/316 (66%), Gaps = 30/316 (9%)
Strand=Plus/Plus
Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83
|| ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | ||
Sbjct 223 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 282
Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143
|||||||| | ||| ||| | | |||| | | ||| || |||
Sbjct 283 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 328
Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203
|||| ||| || | || | | |||||| | ||| ||| || ||||
Sbjct 329 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 372
Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263
| |||||| ||| |||| || || || | ||||||||||| | | | ||
Sbjct 373 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 432
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323
|||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 433 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 492
Query 324 GCCGTAAACGATGAAT 339
|| | || ||||||
Sbjct 493 GCAGATAATTATGAAT 508
>seq288
Length=4041
Score = 84.2 bits (92), Expect = 5e-14
Identities = 209/316 (66%), Gaps = 30/316 (9%)
Strand=Plus/Plus
Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83
|| ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | ||
Sbjct 3600 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 3659
Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143
|||||||| | ||| ||| | | |||| | | ||| || |||
Sbjct 3660 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 3705
Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203
|||| ||| || | || | | |||||| | ||| ||| || ||||
Sbjct 3706 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 3749
Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263
| |||||| ||| |||| || || || | ||||||||||| | | | ||
Sbjct 3750 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 3809
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323
|||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 3810 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 3869
Query 324 GCCGTAAACGATGAAT 339
|| | || ||||||
Sbjct 3870 GCAGATAATTATGAAT 3885
>seq286
Length=3561
Score = 84.2 bits (92), Expect = 5e-14
Identities = 209/316 (66%), Gaps = 30/316 (9%)
Strand=Plus/Plus
Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83
|| ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | ||
Sbjct 1711 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 1770
Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143
|||||||| | ||| ||| | | |||| | | ||| || |||
Sbjct 1771 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 1816
Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203
|||| ||| || | || | | |||||| | ||| ||| || ||||
Sbjct 1817 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 1860
Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263
| |||||| ||| |||| || || || | ||||||||||| | | | ||
Sbjct 1861 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 1920
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323
|||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 1921 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 1980
Query 324 GCCGTAAACGATGAAT 339
|| | || ||||||
Sbjct 1981 GCAGATAATTATGAAT 1996
>seq258
Length=1485
Score = 84.2 bits (92), Expect = 5e-14
Identities = 209/316 (66%), Gaps = 30/316 (9%)
Strand=Plus/Plus
Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83
|| ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | ||
Sbjct 826 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 885
Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143
|||||||| | ||| ||| | | |||| | | ||| || |||
Sbjct 886 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 931
Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203
|||| ||| || | || | | |||||| | ||| ||| || ||||
Sbjct 932 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 975
Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263
| |||||| ||| |||| || || || | ||||||||||| | | | ||
Sbjct 976 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 1035
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323
|||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 1036 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 1095
Query 324 GCCGTAAACGATGAAT 339
|| | || ||||||
Sbjct 1096 GCAGATAATTATGAAT 1111
>seq242
Length=8359
Score = 84.2 bits (92), Expect = 5e-14
Identities = 209/316 (66%), Gaps = 30/316 (9%)
Strand=Plus/Minus
Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83
|| ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | ||
Sbjct 296 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 237
Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143
|||||||| | ||| ||| | | |||| | | ||| || |||
Sbjct 236 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 191
Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203
|||| ||| || | || | | |||||| | ||| ||| || ||||
Sbjct 190 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 147
Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263
| |||||| ||| |||| || || || | ||||||||||| | | | ||
Sbjct 146 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 87
Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323
|||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||||
Sbjct 86 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 27
Query 324 GCCGTAAACGATGAAT 339
|| | || ||||||
Sbjct 26 GCAGATAATTATGAAT 11
>seq536
Length=621
Score = 82.4 bits (90), Expect = 2e-13
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259
|||| | |||||| ||| |||| || || || | ||||||||||| | | |
Sbjct 254 GTAGAGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCT 313
Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319
|||||||| ||||| |||| || ||||| |||||||||||||||||||| |||||
Sbjct 314 AATAACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGT 373
Query 320 CCACGCCGTAAACGATGAAT 339
||| || | || ||||||
Sbjct 374 CCAAGCAGATAATTATGAAT 393
>seq524
Length=794
Score = 82.4 bits (90), Expect = 2e-13
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259
|||| | |||||| ||| |||| || || || | ||||||||||| | | |
Sbjct 360 GTAGAGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCT 301
Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319
|||||||| ||||| |||| || ||||| |||||||||||||||||||| |||||
Sbjct 300 AATAACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGT 241
Query 320 CCACGCCGTAAACGATGAAT 339
||| || | || ||||||
Sbjct 240 CCAAGCAGATAATTATGAAT 221
>seq243
Length=1323
Score = 73.4 bits (80), Expect = 1e-10
Identities = 63/78 (81%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 262 TAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 321
|||||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||
Sbjct 1318 TAACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCC 1259
Query 322 ACGCCGTAAACGATGAAT 339
| || | || ||||||
Sbjct 1258 AAGCAGATAATTATGAAT 1241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203193262080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |