Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq273 86.0 2e-14 seq502 84.2 5e-14 seq469 84.2 5e-14 seq382 84.2 5e-14 seq363 84.2 5e-14 seq288 84.2 5e-14 seq286 84.2 5e-14 seq258 84.2 5e-14 seq242 84.2 5e-14 seq536 82.4 2e-13 seq524 82.4 2e-13 seq243 73.4 1e-10 >seq273 Length=1002 Score = 86.0 bits (94), Expect = 2e-14 Identities = 211/317 (67%), Gaps = 31/317 (10%) Strand=Plus/Minus Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83 || ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | || Sbjct 898 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 839 Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 |||||||| | ||| ||| | | |||| | | ||| || ||| Sbjct 838 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 793 Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203 |||| ||| || | || | | |||||| | ||| ||| || |||| Sbjct 792 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 749 Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTG-T 262 | |||||| ||| |||| || || || | ||||||||||| | | | || | Sbjct 748 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTTATCTAAT 689 Query 263 AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCA 322 ||||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||| Sbjct 688 AACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCA 629 Query 323 CGCCGTAAACGATGAAT 339 || | || |||||| Sbjct 628 AGCAGATAATTATGAAT 612 >seq502 Length=1018 Score = 84.2 bits (92), Expect = 5e-14 Identities = 209/316 (66%), Gaps = 30/316 (9%) Strand=Plus/Plus Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83 || ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | || Sbjct 62 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 121 Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 |||||||| | ||| ||| | | |||| | | ||| || ||| Sbjct 122 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 167 Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203 |||| ||| || | || | | |||||| | ||| ||| || |||| Sbjct 168 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 211 Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263 | |||||| ||| |||| || || || | ||||||||||| | | | || Sbjct 212 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 271 Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||| Sbjct 272 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 331 Query 324 GCCGTAAACGATGAAT 339 || | || |||||| Sbjct 332 GCAGATAATTATGAAT 347 >seq469 Length=871 Score = 84.2 bits (92), Expect = 5e-14 Identities = 209/316 (66%), Gaps = 30/316 (9%) Strand=Plus/Plus Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83 || ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | || Sbjct 274 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 333 Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 |||||||| | ||| ||| | | |||| | | ||| || ||| Sbjct 334 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 379 Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203 |||| ||| || | || | | |||||| | ||| ||| || |||| Sbjct 380 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 423 Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263 | |||||| ||| |||| || || || | ||||||||||| | | | || Sbjct 424 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 483 Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||| Sbjct 484 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 543 Query 324 GCCGTAAACGATGAAT 339 || | || |||||| Sbjct 544 GCAGATAATTATGAAT 559 >seq382 Length=1051 Score = 84.2 bits (92), Expect = 5e-14 Identities = 209/316 (66%), Gaps = 30/316 (9%) Strand=Plus/Minus Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83 || ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | || Sbjct 1042 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 983 Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 |||||||| | ||| ||| | | |||| | | ||| || ||| Sbjct 982 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 937 Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203 |||| ||| || | || | | |||||| | ||| ||| || |||| Sbjct 936 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 893 Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263 | |||||| ||| |||| || || || | ||||||||||| | | | || Sbjct 892 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 833 Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||| Sbjct 832 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 773 Query 324 GCCGTAAACGATGAAT 339 || | || |||||| Sbjct 772 GCAGATAATTATGAAT 757 >seq363 Length=853 Score = 84.2 bits (92), Expect = 5e-14 Identities = 209/316 (66%), Gaps = 30/316 (9%) Strand=Plus/Plus Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83 || ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | || Sbjct 223 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 282 Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 |||||||| | ||| ||| | | |||| | | ||| || ||| Sbjct 283 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 328 Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203 |||| ||| || | || | | |||||| | ||| ||| || |||| Sbjct 329 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 372 Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263 | |||||| ||| |||| || || || | ||||||||||| | | | || Sbjct 373 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 432 Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||| Sbjct 433 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 492 Query 324 GCCGTAAACGATGAAT 339 || | || |||||| Sbjct 493 GCAGATAATTATGAAT 508 >seq288 Length=4041 Score = 84.2 bits (92), Expect = 5e-14 Identities = 209/316 (66%), Gaps = 30/316 (9%) Strand=Plus/Plus Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83 || ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | || Sbjct 3600 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 3659 Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 |||||||| | ||| ||| | | |||| | | ||| || ||| Sbjct 3660 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 3705 Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203 |||| ||| || | || | | |||||| | ||| ||| || |||| Sbjct 3706 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 3749 Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263 | |||||| ||| |||| || || || | ||||||||||| | | | || Sbjct 3750 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 3809 Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||| Sbjct 3810 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 3869 Query 324 GCCGTAAACGATGAAT 339 || | || |||||| Sbjct 3870 GCAGATAATTATGAAT 3885 >seq286 Length=3561 Score = 84.2 bits (92), Expect = 5e-14 Identities = 209/316 (66%), Gaps = 30/316 (9%) Strand=Plus/Plus Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83 || ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | || Sbjct 1711 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 1770 Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 |||||||| | ||| ||| | | |||| | | ||| || ||| Sbjct 1771 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 1816 Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203 |||| ||| || | || | | |||||| | ||| ||| || |||| Sbjct 1817 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 1860 Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263 | |||||| ||| |||| || || || | ||||||||||| | | | || Sbjct 1861 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 1920 Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||| Sbjct 1921 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 1980 Query 324 GCCGTAAACGATGAAT 339 || | || |||||| Sbjct 1981 GCAGATAATTATGAAT 1996 >seq258 Length=1485 Score = 84.2 bits (92), Expect = 5e-14 Identities = 209/316 (66%), Gaps = 30/316 (9%) Strand=Plus/Plus Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83 || ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | || Sbjct 826 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 885 Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 |||||||| | ||| ||| | | |||| | | ||| || ||| Sbjct 886 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 931 Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203 |||| ||| || | || | | |||||| | ||| ||| || |||| Sbjct 932 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 975 Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263 | |||||| ||| |||| || || || | ||||||||||| | | | || Sbjct 976 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 1035 Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||| Sbjct 1036 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 1095 Query 324 GCCGTAAACGATGAAT 339 || | || |||||| Sbjct 1096 GCAGATAATTATGAAT 1111 >seq242 Length=8359 Score = 84.2 bits (92), Expect = 5e-14 Identities = 209/316 (66%), Gaps = 30/316 (9%) Strand=Plus/Minus Query 24 AACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGG 83 || ||||||||||||| ||||||||||||||| | |||| ||||| | ||| | || Sbjct 296 AATTACGTGCCAGCAGTCGCGGTAATACGTAGAAGACTAGTGTTATTCATCTTTAATAGG 237 Query 84 CGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGG 143 |||||||| | ||| ||| | | |||| | | ||| || ||| Sbjct 236 TTTAAAGGGTACCTAGACGGTATAATTAGTCCAAA---ACAGGATA-----CAA------ 191 Query 144 GACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAG 203 |||| ||| || | || | | |||||| | ||| ||| || |||| Sbjct 190 ------TTTT---ACT--AGAGTTATATAGGAGGAGGTG--AGT---ATTTATACAGTAG 147 Query 204 CGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTA 263 | |||||| ||| |||| || || || | ||||||||||| | | | || Sbjct 146 AGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCTAATA 87 Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||| |||| || ||||| |||||||||||||||||||| |||||||| Sbjct 86 ACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCCAA 27 Query 324 GCCGTAAACGATGAAT 339 || | || |||||| Sbjct 26 GCAGATAATTATGAAT 11 >seq536 Length=621 Score = 82.4 bits (90), Expect = 2e-13 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 |||| | |||||| ||| |||| || || || | ||||||||||| | | | Sbjct 254 GTAGAGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCT 313 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319 |||||||| ||||| |||| || ||||| |||||||||||||||||||| ||||| Sbjct 314 AATAACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGT 373 Query 320 CCACGCCGTAAACGATGAAT 339 ||| || | || |||||| Sbjct 374 CCAAGCAGATAATTATGAAT 393 >seq524 Length=794 Score = 82.4 bits (90), Expect = 2e-13 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 |||| | |||||| ||| |||| || || || | ||||||||||| | | | Sbjct 360 GTAGAGATGAAATTCGTTGATAGTATGAAGACTGATAATGGCGAAGGCGACCTTTTATCT 301 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319 |||||||| ||||| |||| || ||||| |||||||||||||||||||| ||||| Sbjct 300 AATAACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGT 241 Query 320 CCACGCCGTAAACGATGAAT 339 ||| || | || |||||| Sbjct 240 CCAAGCAGATAATTATGAAT 221 >seq243 Length=1323 Score = 73.4 bits (80), Expect = 1e-10 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 262 TAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCC 321 |||||||| ||||| |||| || ||||| |||||||||||||||||||| ||||||| Sbjct 1318 TAACTGACGTTGAGGGACGAAGGCTCGGGGAACAAACAGGATTAGATACCCTAGTAGTCC 1259 Query 322 ACGCCGTAAACGATGAAT 339 | || | || |||||| Sbjct 1258 AAGCAGATAATTATGAAT 1241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203193262080