Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq357 495 7e-138 seq275 495 7e-138 seq381 351 2e-94 seq278 327 2e-87 seq489 210 4e-52 >seq357 Length=2118 Score = 495 bits (548), Expect = 7e-138 Identities = 295/309 (95%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct 271 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 330 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 331 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 390 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 391 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGTCG 450 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 451 AAAGGCCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 510 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| ||||||| |||||||||| Sbjct 511 CTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGAATACGTCCCTG 570 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 571 CCCTTTGTA 579 >seq275 Length=7890 Score = 495 bits (548), Expect = 7e-138 Identities = 295/309 (95%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct 7274 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 7215 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7214 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 7155 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 7154 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGTCG 7095 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7094 AAAGGCCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 7035 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| ||||||| |||||||||| Sbjct 7034 CTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGAATACGTCCCTG 6975 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 6974 CCCTTTGTA 6966 >seq381 Length=820 Score = 351 bits (388), Expect = 2e-94 Identities = 206/214 (96%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct 606 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 665 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 666 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 725 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 726 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGTCG 785 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 |||| |||||||||||||||||||||||||||| Sbjct 786 AAAGGCCTGGGTAATCTTGTTAAACTCTGTCGTG 819 >seq278 Length=3014 Score = 327 bits (362), Expect = 2e-87 Identities = 193/201 (96%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct 201 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 142 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 82 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 81 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGTCG 22 Query 200 GAAGGTCTGGGTAATCTTGTT 220 |||| ||||||||||||||| Sbjct 21 AAAGGCCTGGGTAATCTTGTT 1 >seq489 Length=619 Score = 210 bits (232), Expect = 4e-52 Identities = 124/129 (96%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct 129 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 70 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 69 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 10 Query 140 GATGTTCTG 148 ||||||||| Sbjct 9 GATGTTCTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947194695680