Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq357 495 7e-138
seq275 495 7e-138
seq381 351 2e-94
seq278 327 2e-87
seq489 210 4e-52
>seq357
Length=2118
Score = 495 bits (548), Expect = 7e-138
Identities = 295/309 (95%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 271 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 330
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 331 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 390
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 391 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGTCG 450
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 451 AAAGGCCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 510
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||| ||||||||||
Sbjct 511 CTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGAATACGTCCCTG 570
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 571 CCCTTTGTA 579
>seq275
Length=7890
Score = 495 bits (548), Expect = 7e-138
Identities = 295/309 (95%), Gaps = 0/309 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 7274 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 7215
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7214 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 7155
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 7154 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGTCG 7095
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7094 AAAGGCCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 7035
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||| ||||||||||
Sbjct 7034 CTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGAATACGTCCCTG 6975
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 6974 CCCTTTGTA 6966
>seq381
Length=820
Score = 351 bits (388), Expect = 2e-94
Identities = 206/214 (96%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 606 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 665
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 666 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 725
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 726 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGTCG 785
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
|||| ||||||||||||||||||||||||||||
Sbjct 786 AAAGGCCTGGGTAATCTTGTTAAACTCTGTCGTG 819
>seq278
Length=3014
Score = 327 bits (362), Expect = 2e-87
Identities = 193/201 (96%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 201 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 142
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 141 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 82
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 81 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGTCG 22
Query 200 GAAGGTCTGGGTAATCTTGTT 220
|||| |||||||||||||||
Sbjct 21 AAAGGCCTGGGTAATCTTGTT 1
>seq489
Length=619
Score = 210 bits (232), Expect = 4e-52
Identities = 124/129 (96%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 129 GAACGAGACCTTAACCTACTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 70
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 10
Query 140 GATGTTCTG 148
|||||||||
Sbjct 9 GATGTTCTG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947194695680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |