Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26]
560 sequences; 41,384,521 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq275 803 0.0
seq284 798 0.0
seq391 652 0.0
seq493 331 3e-88
seq517 147 7e-33
seq474 77.0 1e-11
>seq275
Length=7890
Score = 803 bits (890), Expect = 0.0
Identities = 503/538 (93%), Gaps = 5/538 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3649 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 3708
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3709 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 3768
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||||| |||| ||| | ||| ||||||||||||||||||
Sbjct 3769 AGCCCGCGAAGGACCTTAACGCTAGAAGTTGGGCTTTGACACCCAGTTCCGCTTCATTGA 3828
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||
Sbjct 3829 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 3885
Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
||||||| ||||| | ||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct 3886 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 3944
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3945 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 4004
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4005 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 4064
Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 4065 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCTGCGCTTGGTTGAATTAC 4124
Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 4125 TTCACTTTAACATTCAAGGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 4182
>seq284
Length=3082
Score = 798 bits (884), Expect = 0.0
Identities = 503/539 (93%), Gaps = 6/539 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 1617
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1618 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1677
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||||| |||| ||| | ||| ||||||||||||||||||
Sbjct 1678 AGCCCGCGAAGGACCTTAACGCTAGAAGTTGGGCTTTGACACCCAGTTCCGCTTCATTGA 1737
Query 187 TTAAGTaaaaaaa-CGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
|||||||||||| |||||| |||||||||||||||| |||||||| |||||||| |
Sbjct 1738 ATAAGTAAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCT 1794
Query 246 ATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|||||||| ||||| | ||| |||||||| ||| |||||||||||||||||||||||||
Sbjct 1795 ATTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 1853
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1854 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 1913
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 1973
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1974 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCTGCGCTTGGTTGAATTA 2033
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 2034 CTTCACTTTAACATTCAAGGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 2092
>seq391
Length=804
Score = 652 bits (722), Expect = 0.0
Identities = 410/439 (93%), Gaps = 5/439 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 428
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 429 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 488
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||||| |||| ||| | ||| ||||||||||||||||||
Sbjct 489 AGCCCGCGAAGGACCTTAACGCTAGAAGTTGGGCTTTGACACCCAGTTCCGCTTCATTGA 548
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||||||||| |||||||||||||||| |||||||| |||||||| ||
Sbjct 549 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTA 605
Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
||||||| ||||| | ||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct 606 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 664
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 665 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 724
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 725 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 784
Query 426 TTGGCTACCTTAAGAGAGT 444
|||||||||||||||||||
Sbjct 785 TTGGCTACCTTAAGAGAGT 803
>seq493
Length=534
Score = 331 bits (366), Expect = 3e-88
Identities = 196/203 (97%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 341 GCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG 400
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 534 GCTGTGGTTTCGCTAGATAGTAGATAGG-ACAGTGGGAATCTCGTTAATCCATTCATGCG 476
Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 416
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
||||||| ||||||||||||||| ||||||||| ||||||| |||||||||||||||||
Sbjct 415 GTTTACCTGCGCTTGGTTGAATTACTTCACTTTAACATTCAAGGCACTGGGCAGAAATCA 356
Query 521 CATTGCGTCAACATCACTTTCTG 543
||||||||||||| |||||||||
Sbjct 355 CATTGCGTCAACACCACTTTCTG 333
>seq517
Length=545
Score = 147 bits (162), Expect = 7e-33
Identities = 90/96 (94%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
|||||||||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||
Sbjct 545 AGTTACTCCCGCCGTTTACCTGCGCTTGGTTGAATTACTTCACTTTAACATTCAAGGCAC 486
Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||| |||||||||
Sbjct 485 TGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 450
>seq474
Length=672
Score = 77.0 bits (84), Expect = 1e-11
Identities = 48/52 (92%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|| ||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 672 TTAACATTCAAGGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635190842880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |