Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20candidum_20[genbank_20GCA_5F000743665.1_202014-08-26] 560 sequences; 41,384,521 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq73 284 1e-71 seq24 114 1e-20 >seq73 Length=484926 Score = 284 bits (314), Expect = 1e-71 Identities = 639/952 (67%), Gaps = 6/952 (1%) Strand=Plus/Minus Query 65991 CCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGG 66050 ||||||| ||||||| |||| ||| || | |||||||||||| | ||| || | || | Sbjct 51440 CCACAAAGGTGGGAAGTGCAATAGAGGCCAAGTTGCAGACAGCAACCTCATCCGCAGATG 51381 Query 66051 TATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGAT 66110 || |||||||| || ||||||| || || || || || |||| |||| || | Sbjct 51380 AGTATTCGACAATCTCTGTGCACAAGTTGGAGCTACGGATAGTTCCCAGGTTCTTCTGGT 51321 Query 66111 TACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGG 66170 | |||||||| ||||| ||||||||||| | |||| | || | || ||||| ||| | Sbjct 51320 TGCTCTTGCGGTTGCACGCATCCTTGTAGAGCATGAATGGGTTTCCAGTCTCGGTTTGTG 51261 Query 66171 ACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTG 66229 |||| ||||| | ||| || | ||||| || || | | | ||||| || | | Sbjct 51260 CTTCAAGGATGGAATACCAGAGCTTTTGAGCCTTTACGGT-CTTTCGGCCCTTGCCCTCG 51202 Query 66230 CGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289 || || || | ||||| | ||| || || || | || || | |||| ||| Sbjct 51201 CGCTCATACTTCTCGTACAAAGCTTCAAACTCATCTCCGTAGACATCTGCTAGACCAGGA 51142 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349 |||| | |||||||||||| | ||| || || | | || || | ||| || ||| Sbjct 51141 CACTCATTTGGACACATCAGGGTCCACTCTCCGTTTTTCTCAACCCTCTTCATGAAGAGA 51082 Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409 || || ||||| | ||| ||||||||||||||||| || ||||| | || ||||| Sbjct 51081 TCGGGAATCCACAAGGCATAGAAGAGATCGCGTGCACGAACTTCCTCCTTACCATGATTC 51022 Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469 || | | ||||||||||| |||| || || |||||||| || |||||||| || || Sbjct 51021 TTTCTGAGATCGAGGAACTCGAAGACATCAGCGTGCCATGGCTCAAGGTAGATAGCAAAG 50962 Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529 | || ||| ||| |||||||| || || || | || |||||||| |||||| Sbjct 50961 GCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCTGTGTTGTTGAAAACACGC 50902 Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC 66589 | ||| || || | || || || || ||||||||| ||| ||| || || Sbjct 50901 AGCATTGGCACAATACCATTCGAGAAACCGTTGGTGCCGGAAATGTAGGAGCCAGTAGCT 50842 Query 66590 CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCG 66649 || || ||| | ||| |||||||| |||||||| ||||||| || |||||| Sbjct 50841 CGGATTCTGTGGATATTGAGACCAATGCCACCGGCATTCTTCGAAATCATAGCACATGTC 50782 Query 66650 GCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAA 66709 || || | || || |||||| ||| |||| || | |||| ||||||| Sbjct 50781 TTCAGGGTATCATAGATACCATCAATGCTGTCTTCCTTCATATCTACGAGGAAGCATGAT 50722 Query 66710 CTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAA 66769 | || | | || || | || |||||| || || | ||| || || ||||| Sbjct 50721 GACATCTGAGCCTGAGGGGTTCCAGCACTGAAGAGTGTAGGAGAAGCATGTGTGAAGTAC 50662 Query 66770 TGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCG 66829 | | ||||| | ||||| |||||||| | | ||||| | ||||||||| || || Sbjct 50661 TTGTTCGACATCAAGTTGTATGTCTCGATTGCGGATTCAATATCTTCGCCATGGATACCA 50602 Query 66830 AGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA-GCCGATCCTTGATATGCA 66887 | | |||| ||||| | | || ||| || || || |||| | || | || | | | | Sbjct 50601 ACAGCCACA-CGCATGATCATGTGTTGTGGGCGCTCAACCACGGCG-TTATTAAGACGGA 50544 Query 66888 TTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 | ||| || || |||| ||||||| ||||| || ||| |||||||| Sbjct 50543 GGAGGTATGAACGCTCCAATGTCTTGAATCCAAAATATTGGTAGTTGAAATC 50492 Score = 113 bits (124), Expect = 4e-20 Identities = 318/478 (67%), Gaps = 24/478 (5%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGAT---CGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCG 65134 ||||| ||||| || || |||| | || ||| | || | ||||| ||||||||| Sbjct 52335 TCGACAGTGAATTGAATAGGCGCACTGGCGGCCA---TTGTGCGGAGATAATACATGCCG 52279 Query 65135 GTCTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGG 65193 ||||| | |||| ||| || ||||||||| || | || |||| | | || Sbjct 52278 GTCTTCAAGCCAAGCTTCCAGCCAGTGAAATGCATGCTTG-TGATCTTGCCCATGGTGGG 52220 Query 65194 CTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGC 65253 || || || || |||| ||||| |||||| ||| || |||||| || ||||| Sbjct 52219 GTCCTTCATGTGAATGTTCATTGACTGGGACTGATCAATGAAAGCACCACGGTCAGCAGC 52160 Query 65254 CATGT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-A 65309 ||| | ||||| |||| | || |||||||||||||||||||| | | | | | | Sbjct 52159 CATCTGCACAATGTTACGCTGA---GAAATCTCCCAGACGGTCTTGTAGA-GAGCCTTAA 52104 Query 65310 CCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTAC 65369 || ||| || | ||| | ||||| ||||||| | || |||||||| || Sbjct 52103 TATCTGATGGGATGTTGGGAATATTCTGGATGGAACCACCATCAGCGATAATGCGGTTCT 52044 Query 65370 GCATCGACTCTGACCACAAACCCAAATCGATAAGAT-GTTG---AACCAAGTGACGATTG 65425 ||| || ||||| | |||| ||||| ||||| ||| | ||||| | || Sbjct 52043 TCATGTTGTCAGACCAGAGTCCCATATCGACAAGATCCTTGAGAAGCCAAG----GGTTC 51988 Query 65426 ATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCA 65485 | || |||||||| || | || ||||| ||| || |||||||| ||| || ||| Sbjct 51987 ACCACCTGGAACTCTCCTGCAAGCACACGGCGGGAGTAAATGTTGGAGGTGTATGGCTCA 51928 Query 65486 AAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCA 65543 ||| | || || || || || ||| ||| ||||||||||| ||||| |||| Sbjct 51927 AAGCACTCGTTGAAACCAAGGATCTGGCTAGTGCTGGCAGTTGGCATAGGAGCAACCA 51870 >seq24 Length=853129 Score = 114 bits (126), Expect = 1e-20 Identities = 309/478 (65%), Gaps = 55/478 (12%) Strand=Plus/Minus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 |||||||| ||||| ||||| || |||||||| ||||| || | || |||||| Sbjct 483910 GCGTTCTTCGCCGCCTCGGATGGCATCGTCAACGAGAACTTGGTTGAGCGTTTCAGTGGT 483851 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || ||||| | | ||||||||||||||||| || |||||||| |||||||| || Sbjct 483850 GAAGTGCAGATTCCTGAGGCGCGTTGTTTCTATGGTTTCCAGATCATGATGGAGAACATC 483791 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 ||||| |||| ||| | || || || ||||| ||| ||||| || |||| || Sbjct 483790 CACTCAGAGACATACTCCCTCCTGATTGACACGTATGTCAAGGAGCCAGCACAACG-GAC 483732 Query 61393 CGATT-GTTCAATGCCATCGAGACG--------ATACC----------GGC------GGT 61427 ||| ||||||||| || || ||| ||| | ||| ||| Sbjct 483731 GTATTTGTTCAATGCTATTGATACGAGTAAGATATATCTGTCTTGAATGGCCGTTATGGT 483672 Query 61428 G---------------------------AAGCGGAAAGCGGATTGGGCCTTCAATTGGA- 61459 | ||| ||| || |||||||| | | |||| Sbjct 483671 GCTAACCTAGAATTAAGTCCCCTGCATCAAGAAGAAGGCCGATTGGGCAGTTAGATGGAT 483612 Query 61460 TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTG 61519 ||| | | || | | || || | |||| ||| | ||||| || | || || || Sbjct 483611 TCAAGACAAGAA-GTCCACCTTCGCCCAACGTTTGGTTGCATTCGCTGCCGTGGAAGGCA 483553 Query 61520 TATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCG 61579 | || |||||||| || ||||| || ||||||||| ||||||| ||||| || ||| | | Sbjct 483552 TTTTCTTCAGTGGTTCTTTTGCAGCTATCTTTTGGCTGAAGAAGCGTGGCCTCATGGCTG 483493 Query 61580 GTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 |||||||||| || ||| | || || || ||||||||| ||||| || ||||| Sbjct 483492 GTCTGACCTTTTCGAACGAGCTCATCTCTCGTGACGAGGGCCTGCATACCGACTTTGC 483435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565286598400