Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geotrichum_20fermentans_20[genbank_20GCA_5F002233575.1_202017-07-25] 3,822 sequences; 31,278,289 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq21 104 4e-20 >seq21 Length=1545 Score = 104 bits (114), Expect = 4e-20 Identities = 121/160 (76%), Gaps = 10/160 (6%) Strand=Plus/Plus Query 163 AACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAA 222 ||| | | ||||||||||||||||||| ||| |||||| |||||||||||||| ||| | Sbjct 4 AACACAGTGAACTGAAACATCTAAGTAACTGTAGGAAAGGAAATCAACCGAGACTCCATA 63 Query 223 AGTAGTGGCGAGCGAAA-TGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATC 281 |||||||| |||||||| ||| || |||| ||| | ||| ||| | ||||| Sbjct 64 AGTAGTGGTGAGCGAAAGTGGAATTAGCC-------AATAAATATATTAATATTAGAATC 116 Query 282 CTCTGGAAATAGG-AGCCATAG-CGGGTGATAGCCCCGTA 319 | |||||| ||| | || ||| ||||| ||||| ||| Sbjct 117 GTTTGGAAAAAGGAATCCGTAGTATGGTGAAAGCCCTGTA 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918364898752