Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq6 149 3e-34 >seq6 Length=13997 Score = 149 bits (164), Expect = 3e-34 Identities = 104/117 (89%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | ||| | | || ||||| Sbjct 1886 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGGCCAATAAAAGG-CACCGCCC 1828 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 1827 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 1771 Score = 149 bits (164), Expect = 3e-34 Identities = 104/117 (89%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| |||||||||||||||||||||||||| | | ||| | | || ||||| Sbjct 9984 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCGAGTGGGCCAATAAAAGG-CACCGCCC 9926 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 9925 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 9869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399955630