Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq6 634 2e-179
>seq6
Length=13997
Score = 634 bits (702), Expect = 2e-179
Identities = 541/658 (82%), Gaps = 16/658 (2%)
Strand=Plus/Plus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||||| ||||||||||||||||||||||||||| || |||| |||||||| | |||||||
Sbjct 3495 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAG 3554
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
|||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| |||
Sbjct 3555 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 3614
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213
||| ||||||||| |||||| ||||||||||||||||||||||| || | | |||||
Sbjct 3615 TTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACA 3674
Query 214 TGCCCGCAGTTGC-TCAACCGGCCCCTCG---GCCGGTGCACTCTTCTGCGGT-CA---G 265
|| |||| | || ||| |||| || | || |||| | || |
Sbjct 3675 TGGTGTTTTTTGCATGCACTCGCCTCTCGTGGGCTTGGGC-CTCTCAAAAATTTCACTGG 3733
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
|||| ||||| || ||| || ||||||| | |||||| || ||| || ||
Sbjct 3734 GCCAACATCAATTCTGGCAGTAGGATAAAT-CATTAAGAATGTAGCTACCTC--GGTAGT 3790
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
|||||||| |||||| | || || ||| ||||| | ||||| |||| ||||||
Sbjct 3791 GTTATAGCTTAT--TGGAATACTGCTAGCTGGGATTGAGGACTGCGCTTCGGCAAGGATG 3848
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
|||| |||||||| | || |||||||||| |||||||||||||||||||||| |||||
Sbjct 3849 TTGGCATAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 3908
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
|||||||||||||||| |||||||| ||||||||||||||||||| |||| || || |
Sbjct 3909 GCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGGCC--T 3966
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|||||||| ||||||||| | |||||| ||||||| | ||||||||||||||||||||
Sbjct 3967 TCGGGTGCACAATCGACCGACCTTGATGTTTTCGGATAGGTTTGAGTAAGAGCATAGCTG 4026
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4027 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 4086
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 4087 GGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 4144
Score = 634 bits (702), Expect = 2e-179
Identities = 541/658 (82%), Gaps = 16/658 (2%)
Strand=Plus/Plus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||||| ||||||||||||||||||||||||||| || |||| |||||||| | |||||||
Sbjct 11594 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAG 11653
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
|||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| |||
Sbjct 11654 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 11713
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213
||| ||||||||| |||||| ||||||||||||||||||||||| || | | |||||
Sbjct 11714 TTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACA 11773
Query 214 TGCCCGCAGTTGC-TCAACCGGCCCCTCG---GCCGGTGCACTCTTCTGCGGT-CA---G 265
|| |||| | || ||| |||| || | || |||| | || |
Sbjct 11774 TGGTGTTTTTTGCATGCACTCGCCTCTCGTGGGCTTGGGC-CTCTCAAAAATTTCACTGG 11832
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
|||| ||||| || ||| || ||||||| | |||||| || ||| || ||
Sbjct 11833 GCCAACATCAATTCTGGCAGTAGGATAAAT-CATTAAGAATGTAGCTACCTC--GGTAGT 11889
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385
|||||||| |||||| | || || ||| ||||| | ||||| |||| ||||||
Sbjct 11890 GTTATAGCTTAT--TGGAATACTGCTAGCTGGGATTGAGGACTGCGCTTCGGCAAGGATG 11947
Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445
|||| |||||||| | || |||||||||| |||||||||||||||||||||| |||||
Sbjct 11948 TTGGCATAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 12007
Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505
|||||||||||||||| |||||||| ||||||||||||||||||| |||| || || |
Sbjct 12008 GCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGGCC--T 12065
Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565
|||||||| ||||||||| | |||||| ||||||| | ||||||||||||||||||||
Sbjct 12066 TCGGGTGCACAATCGACCGACCTTGATGTTTTCGGATAGGTTTGAGTAAGAGCATAGCTG 12125
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12126 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 12185
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 12186 GGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 12243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079999635350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |