Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6 634 2e-179 >seq6 Length=13997 Score = 634 bits (702), Expect = 2e-179 Identities = 541/658 (82%), Gaps = 16/658 (2%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| ||||||||||||||||||||||||||| || |||| |||||||| | ||||||| Sbjct 3495 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAG 3554 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 3555 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 3614 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 3615 TTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACA 3674 Query 214 TGCCCGCAGTTGC-TCAACCGGCCCCTCG---GCCGGTGCACTCTTCTGCGGT-CA---G 265 || |||| | || ||| |||| || | || |||| | || | Sbjct 3675 TGGTGTTTTTTGCATGCACTCGCCTCTCGTGGGCTTGGGC-CTCTCAAAAATTTCACTGG 3733 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 |||| ||||| || ||| || ||||||| | |||||| || ||| || || Sbjct 3734 GCCAACATCAATTCTGGCAGTAGGATAAAT-CATTAAGAATGTAGCTACCTC--GGTAGT 3790 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| |||||| | || || ||| ||||| | ||||| |||| |||||| Sbjct 3791 GTTATAGCTTAT--TGGAATACTGCTAGCTGGGATTGAGGACTGCGCTTCGGCAAGGATG 3848 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 |||| |||||||| | || |||||||||| |||||||||||||||||||||| ||||| Sbjct 3849 TTGGCATAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 3908 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 |||||||||||||||| |||||||| ||||||||||||||||||| |||| || || | Sbjct 3909 GCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGGCC--T 3966 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||||||| ||||||||| | |||||| ||||||| | |||||||||||||||||||| Sbjct 3967 TCGGGTGCACAATCGACCGACCTTGATGTTTTCGGATAGGTTTGAGTAAGAGCATAGCTG 4026 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4027 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 4086 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 4087 GGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 4144 Score = 634 bits (702), Expect = 2e-179 Identities = 541/658 (82%), Gaps = 16/658 (2%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| ||||||||||||||||||||||||||| || |||| |||||||| | ||||||| Sbjct 11594 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAG 11653 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 11654 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 11713 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 11714 TTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACA 11773 Query 214 TGCCCGCAGTTGC-TCAACCGGCCCCTCG---GCCGGTGCACTCTTCTGCGGT-CA---G 265 || |||| | || ||| |||| || | || |||| | || | Sbjct 11774 TGGTGTTTTTTGCATGCACTCGCCTCTCGTGGGCTTGGGC-CTCTCAAAAATTTCACTGG 11832 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 |||| ||||| || ||| || ||||||| | |||||| || ||| || || Sbjct 11833 GCCAACATCAATTCTGGCAGTAGGATAAAT-CATTAAGAATGTAGCTACCTC--GGTAGT 11889 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| |||||| | || || ||| ||||| | ||||| |||| |||||| Sbjct 11890 GTTATAGCTTAT--TGGAATACTGCTAGCTGGGATTGAGGACTGCGCTTCGGCAAGGATG 11947 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 |||| |||||||| | || |||||||||| |||||||||||||||||||||| ||||| Sbjct 11948 TTGGCATAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 12007 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 |||||||||||||||| |||||||| ||||||||||||||||||| |||| || || | Sbjct 12008 GCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGGCC--T 12065 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||||||| ||||||||| | |||||| ||||||| | |||||||||||||||||||| Sbjct 12066 TCGGGTGCACAATCGACCGACCTTGATGTTTTCGGATAGGTTTGAGTAAGAGCATAGCTG 12125 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12126 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 12185 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 12186 GGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 12243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999635350