Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6 298 9e-79 >seq6 Length=13997 Score = 298 bits (330), Expect = 9e-79 Identities = 221/256 (86%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2266 CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGAC 2207 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| | || ||| | |||||||| ||||||| | | Sbjct 2206 CTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCCATAAGAAG--ATTTA 2149 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 ||| | | | | ||||||| ||||||||||||||||||||||| |||||| Sbjct 2148 CCAGCAAATGCCAGCAACTCTATTTAAG-GGTTAAGGTCTCGTTCGTTATCGCAATTAAG 2090 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 2089 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAA 2030 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 2029 GAGCTCTCAATCTGTC 2014 Score = 298 bits (330), Expect = 9e-79 Identities = 221/256 (86%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 10364 CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGAC 10305 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| | || ||| | |||||||| ||||||| | | Sbjct 10304 CTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCCATAAGAAG--ATTTA 10247 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 ||| | | | | ||||||| ||||||||||||||||||||||| |||||| Sbjct 10246 CCAGCAAATGCCAGCAACTCTATTTAAG-GGTTAAGGTCTCGTTCGTTATCGCAATTAAG 10188 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 10187 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAAA 10128 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 10127 GAGCTCTCAATCTGTC 10112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799868777