Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq6 340 3e-91
>seq6
Length=13997
Score = 340 bits (376), Expect = 3e-91
Identities = 264/310 (85%), Gaps = 6/310 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||| ||||||| || || || || ||| |||||||
Sbjct 2105 GAACGAGACCTTAACCCT-TAAATAGAGTTGCTGGCATTTGCTGGTAAAT--CTTCTTAT 2161
Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2162 GGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 2221
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||| ||||||||||||||||||||||||||||| |||||| |||| | || ||| ||
Sbjct 2222 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGCTTTTC--CTTAACC 2279
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| |||| ||||||||||||| |||||| ||||||||||||||||||||||| |||||||
Sbjct 2280 GAGAGGTTTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 2339
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||
Sbjct 2340 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 2399
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 2400 GCCCTTTGTA 2409
Score = 340 bits (376), Expect = 3e-91
Identities = 264/310 (85%), Gaps = 6/310 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||| ||||||| || || || || ||| |||||||
Sbjct 10203 GAACGAGACCTTAACCCT-TAAATAGAGTTGCTGGCATTTGCTGGTAAAT--CTTCTTAT 10259
Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 10260 GGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 10319
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||| ||||||||||||||||||||||||||||| |||||| |||| | || ||| ||
Sbjct 10320 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGCTTTTC--CTTAACC 10377
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| |||| ||||||||||||| |||||| ||||||||||||||||||||||| |||||||
Sbjct 10378 GAGAGGTTTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 10437
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||
Sbjct 10438 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 10497
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 10498 GCCCTTTGTA 10507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199838976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |