Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq6 340 3e-91 >seq6 Length=13997 Score = 340 bits (376), Expect = 3e-91 Identities = 264/310 (85%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||| ||||||| || || || || ||| ||||||| Sbjct 2105 GAACGAGACCTTAACCCT-TAAATAGAGTTGCTGGCATTTGCTGGTAAAT--CTTCTTAT 2161 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2162 GGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 2221 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| |||| | || ||| || Sbjct 2222 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGCTTTTC--CTTAACC 2279 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| ||||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 2280 GAGAGGTTTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 2339 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 2340 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 2399 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 2400 GCCCTTTGTA 2409 Score = 340 bits (376), Expect = 3e-91 Identities = 264/310 (85%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||| ||||||| || || || || ||| ||||||| Sbjct 10203 GAACGAGACCTTAACCCT-TAAATAGAGTTGCTGGCATTTGCTGGTAAAT--CTTCTTAT 10259 Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 10260 GGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 10319 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||| ||||||||||||||||||||||||||||| |||||| |||| | || ||| || Sbjct 10320 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGCTTTTC--CTTAACC 10377 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||| ||||||||||||| |||||| ||||||||||||||||||||||| ||||||| Sbjct 10378 GAGAGGTTTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 10437 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||| Sbjct 10438 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 10497 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 10498 GCCCTTTGTA 10507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199838976