Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq6 765 0.0
>seq6
Length=13997
Score = 765 bits (848), Expect = 0.0
Identities = 496/539 (92%), Gaps = 6/539 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5921 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 5862
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 5861 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 5802
Query 127 GGCCCGCGAAGGACCTTAACGCCA-GAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||||| |||||| |||| | |||| || |||| |||||||||| | ||||
Sbjct 5801 AGCCCGTAAAGGACGTTAAATACTTGAAAGAGGAAAATGAATTCCAGTTCCGCATTATTG 5742
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||| ||||||||| ||||| ||||||||||| |||||||| |||||| |||
Sbjct 5741 AATAAGTAAAGAAACGATAAAGGTAGAGGTATTTCACTGGCGCCGAA---GCTCCCTCTT 5685
Query 246 ATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|| ||||||| ||| | ||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 5684 ATGCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 5626
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 5625 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 5566
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5565 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 5506
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5505 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 5446
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5445 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 5387
Score = 733 bits (812), Expect = 0.0
Identities = 475/516 (92%), Gaps = 6/516 (1%)
Strand=Plus/Minus
Query 30 GTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAG 89
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 13997 GTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAG 13938
Query 90 CCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGACCTTAACGCC 149
|||||||||||||||||||||||| |||||||||||| ||||| |||||| |||| |
Sbjct 13937 CCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCAGCCCGTAAAGGACGTTAAATAC 13878
Query 150 A-GAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGG 208
|||| || |||| |||||||||| | ||||| |||||||| ||||||||| ||
Sbjct 13877 TTGAAAGAGGAAAATGAATTCCAGTTCCGCATTATTGAATAAGTAAAGAAACGATAAAGG 13818
Query 209 TAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATT 267
||| ||||||||||| |||||||| |||||| ||||| ||||||| ||| | ||| |
Sbjct 13817 TAGAGGTATTTCACTGGCGCCGAA---GCTCCCTCTTATGCTACACC-CTCTATGTCTCT 13762
Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327
|||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 13761 TCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAA 13702
Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13701 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 13642
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13641 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 13582
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13581 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 13522
Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||||||
Sbjct 13521 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 13486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635199722016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |