Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq6 212 1e-52 >seq6 Length=13997 Score = 212 bits (234), Expect = 1e-52 Identities = 228/293 (78%), Gaps = 19/293 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| | Sbjct 6245 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 6302 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 6303 GCCGCGAAGCTACCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 6362 Query 121 GAACGGGGTGATTCTCT--CCTGCACATCGTAGTCGGATACGAATAGG-----CTT---- 169 ||| | | ||||| | | | | |||||| ||| ||||||||||| | ||| Sbjct 6363 GAAAGCGATGATTTTTTGCCTTACACATCATAGATGGATACGAATAAGGTGTTCTTGTAA 6422 Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCC--CGCGGAA--GCGCGGGGCGCTC 225 | | | ||||| |||||||| |||||| ||||| | ||||| | ||||| | Sbjct 6423 CACCGCTGAACCATAGCAGGCTGGCAAC-GGCGTTCTTTCCGGAAAGGGATTGGGCG-TT 6480 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| | |||||||| ||| |||| ||||||||| |||| | ||||| Sbjct 6481 TGCTGGTGAATTGCAATGTCATTTTGCGTGAGGATAAATCATTTGTAAACGAC 6533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199865088