Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq6 695 0.0
>seq6
Length=13997
Score = 695 bits (770), Expect = 0.0
Identities = 461/506 (91%), Gaps = 8/506 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||
Sbjct 1304 GTACTCATTCCAATTACAAGACATAAA---GCCCTGTATCGTTATTTATTGTCACTACCT 1248
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1247 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1188
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 1187 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 1128
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1127 GGCCACTATCCTACCATCAAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 1068
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|| ||||||||||||| |||||||||||||||| || || ||||| | | ||| |
Sbjct 1067 TAAAGCCATGCGATTCGAAAAGTTATTATGAATCATCA--GAAGTCCGAA-GACATTGAT 1011
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||||||| |||||| ||| ||| |||| ||||||||||||||||||
Sbjct 1010 TTTTTATCTAATAAATACATCCCTTCGTGAGTTGGGATTTTAAGCATGTATTAGCTCTAG 951
Query 361 AATTACCAC-GGTTATCCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 950 AATTACCACAGGTATTCCATGTAGTAAAGAAACTATCAAATAAACGATAACTGATTTAAT 891
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 890 GAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTT 831
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 830 TGAGACAAGCATATGACTACTGGCAG 805
Score = 695 bits (770), Expect = 0.0
Identities = 461/506 (91%), Gaps = 8/506 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||
Sbjct 9402 GTACTCATTCCAATTACAAGACATAAA---GCCCTGTATCGTTATTTATTGTCACTACCT 9346
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9345 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 9286
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 9285 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 9226
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 9225 GGCCACTATCCTACCATCAAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 9166
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|| ||||||||||||| |||||||||||||||| || || ||||| | | ||| |
Sbjct 9165 TAAAGCCATGCGATTCGAAAAGTTATTATGAATCATCA--GAAGTCCGAA-GACATTGAT 9109
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||||||| |||||| ||| ||| |||| ||||||||||||||||||
Sbjct 9108 TTTTTATCTAATAAATACATCCCTTCGTGAGTTGGGATTTTAAGCATGTATTAGCTCTAG 9049
Query 361 AATTACCAC-GGTTATCCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 9048 AATTACCACAGGTATTCCATGTAGTAAAGAAACTATCAAATAAACGATAACTGATTTAAT 8989
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 8988 GAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTT 8929
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 8928 TGAGACAAGCATATGACTACTGGCAG 8903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510399743232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |