Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq6 695 0.0 >seq6 Length=13997 Score = 695 bits (770), Expect = 0.0 Identities = 461/506 (91%), Gaps = 8/506 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| Sbjct 1304 GTACTCATTCCAATTACAAGACATAAA---GCCCTGTATCGTTATTTATTGTCACTACCT 1248 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1247 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1188 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 1187 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 1128 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 1127 GGCCACTATCCTACCATCAAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 1068 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 || ||||||||||||| |||||||||||||||| || || ||||| | | ||| | Sbjct 1067 TAAAGCCATGCGATTCGAAAAGTTATTATGAATCATCA--GAAGTCCGAA-GACATTGAT 1011 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||| |||||| ||| ||| |||| |||||||||||||||||| Sbjct 1010 TTTTTATCTAATAAATACATCCCTTCGTGAGTTGGGATTTTAAGCATGTATTAGCTCTAG 951 Query 361 AATTACCAC-GGTTATCCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 950 AATTACCACAGGTATTCCATGTAGTAAAGAAACTATCAAATAAACGATAACTGATTTAAT 891 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 890 GAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTT 831 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 830 TGAGACAAGCATATGACTACTGGCAG 805 Score = 695 bits (770), Expect = 0.0 Identities = 461/506 (91%), Gaps = 8/506 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| Sbjct 9402 GTACTCATTCCAATTACAAGACATAAA---GCCCTGTATCGTTATTTATTGTCACTACCT 9346 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9345 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 9286 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 9285 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 9226 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 9225 GGCCACTATCCTACCATCAAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 9166 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 || ||||||||||||| |||||||||||||||| || || ||||| | | ||| | Sbjct 9165 TAAAGCCATGCGATTCGAAAAGTTATTATGAATCATCA--GAAGTCCGAA-GACATTGAT 9109 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||||| |||||| ||| ||| |||| |||||||||||||||||| Sbjct 9108 TTTTTATCTAATAAATACATCCCTTCGTGAGTTGGGATTTTAAGCATGTATTAGCTCTAG 9049 Query 361 AATTACCAC-GGTTATCCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 9048 AATTACCACAGGTATTCCATGTAGTAAAGAAACTATCAAATAAACGATAACTGATTTAAT 8989 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 8988 GAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTT 8929 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 8928 TGAGACAAGCATATGACTACTGGCAG 8903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399743232