Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq11 149 5e-31
seq2 140 3e-28
>seq11
Length=1501259
Score = 149 bits (164), Expect = 5e-31
Identities = 574/891 (64%), Gaps = 20/891 (2%)
Strand=Plus/Minus
Query 66089 ATGGTGCCCAAATTCTGTTGATT--ACT-CTTGCGATTGCATGCATCCTTGTACATCATG 66145
||||| ||||| |||| ||| || ||| |||| || || | ||||||||| | |||
Sbjct 717728 ATGGTACCCAAGTTCTTTTGGTTGGACTTCTTG---TTACAGGAATCCTTGTAAACAATG 717672
Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205
| ||||| || || ||| ||| | || | |||||||| ||| | | |||||
Sbjct 717671 AATGGAGTACCAGTTTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTG 717612
Query 66206 ACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264
| || | | | || || |||| || || || || || || | |||||| |||
Sbjct 717611 ATGGT-CTTTCTWCCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAA---TTC 717556
Query 66265 ACC-CCATA--CTTCGGACAGACATGGACACTTGTGT-GGACACATCAGCGACCAATCAC 66320
| | ||||| | || || || |||| ||| | ||| | | || | |||||||
Sbjct 717555 ATCACCATAAGCATCACTCAAACCTGGAG-CTTCACTAGGAGAGAACAAGGTCCAATCAG 717497
Query 66321 CATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378
||| || || || | ||| || | ||| || ||||| || || ||| | ||
Sbjct 717496 CAT--TGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTC 717439
Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438
| |||| || || | ||||| || || | | ||| | ||| |||||||| ||
Sbjct 717438 TCTGGCTCTGATTTCTTCTTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATC 717379
Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498
| ||||||||||||| ||| | ||| || | || | ||| |||||||| ||
Sbjct 717378 TGAGTGCCATGGTTCCAAGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATC 717319
Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558
|| || | ||| ||||||||||| | | ||| || | | || || || | ||
Sbjct 717318 AACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACC 717259
Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618
||||| || | ||| || || | | || | ||| | | || |||||||||
Sbjct 717258 GTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACC 717199
Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGA 66678
||| || ||||| ||||| |||||| || || || | | || |||||||||||
Sbjct 717198 ACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGA 717139
Query 66679 GTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGA 66738
||| |||| || | | | | | || || | ||| ||| | || || ||||
Sbjct 717138 GTCGTCCTTCATTGATACCAAGAAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATT 717079
Query 66739 GAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGAT 66798
||| | || || | ||||| || ||||| ||||||| | ||||| || || ||
Sbjct 717078 GAACAAAGTTGGAGAGGCGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAAT 717019
Query 66799 GACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGG 66858
||| || |||||||| || ||||| || | ||| || ||| | | || ||| ||
Sbjct 717018 GACTTTGTCGATGTTTTCACCGTGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGG 716959
Query 66859 CCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACC 66918
| ||| || | | | | ||||| | || || || || | ||||| |||||||| |||
Sbjct 716958 TCTTTCAACGATCTTACCGTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACC 716899
Query 66919 AAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCCTCATCAAGGGT 66969
|||||| ||| ||||| || || | | |||||| ||||||| ||
Sbjct 716898 AAAGTAGTTGTAGTTGAAGTCTCTATCGAAGATGATGGCAGCATCAAGAGT 716848
Score = 100 bits (110), Expect = 2e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521
|| |||||||| |||| ||||| || ||||| ||| ||||||||||||| ||| ||
Sbjct 718349 TACATGTTGGAAGTGAATGGTTCGAAACATTCATTGTAACCTAGAATTTGGGAAGTGGAA 718290
Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581
||||||||||| ||||| || ||||| ||||||| || || | | | |||| || |
Sbjct 718289 GCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCTTAAACCATGCTTGGCAATCTTCTTC 718230
Query 65582 CGCAATTCGTCCCAGTTCCA 65601
||||| ||||||| |||
Sbjct 718229 TTTAATTCATCCCAGTCCCA 718210
>seq2
Length=1277918
Score = 140 bits (154), Expect = 3e-28
Identities = 294/439 (67%), Gaps = 5/439 (1%)
Strand=Plus/Minus
Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266
|| ||||| |||||||| || || || ||||| ||||| ||||| || | ||| ||||
Sbjct 605996 GTKTTGGCCTTCTTTGCTGCCTCTGATGGTATTGTCAAYGAGAACTTGGTTGAAAATTTC 605937
Query 61267 GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326
| || || ||| | | || || |||||||| || ||||| || |||||
Sbjct 605936 TCTGCTGARGTYCAAATTCCAGAAGCCAAGTGTTTCTAYGGTTTCCAAATCATGATGGAA 605877
Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAA 61386
|| ||||||| || | ||| | | | || || ||||||| ||| ||||
Sbjct 605876 AACATCCACTCAGAAACCTACTCCTTATTGTTGGACACATACATCAAGGACMCTAAGGAA 605817
Query 61387 CGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGG 61446
||| || ||||||||||| || || || || | | ||| || || || |||
Sbjct 605816 AACGAATTCTTATTCAATGCCATAGAAACCATTCCTGAAATCAAGGAAAAGGCCGAATGG 605757
Query 61447 GCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTG 61504
||| ||| ||||| ||| |||| | || |||| |||| || || | || || |
Sbjct 605756 GCCATCAGATGGAT--CCAAGACAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCG 605699
Query 61505 CGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAAC 61564
| | || |||||||| || ||| ||||| ||||| || ||||| ||||| |||||
Sbjct 605698 CTGCTGTTGAGGGTGTCTTCTTCTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGA 605639
Query 61565 GTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGC 61624
|| | ||||| ||| |||||||| ||| |||||||| | | ||||| || | |
Sbjct 605638 AAGGTTTGATGCCTGGTTTGACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTAC 605579
Query 61625 ATTGTGATTTTG-CTGTTT 61642
| ||| |||| ||||||
Sbjct 605578 ACACTGACTTTGCCTGTTT 605560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567917628880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |