Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq11 149 5e-31 seq2 140 3e-28 >seq11 Length=1501259 Score = 149 bits (164), Expect = 5e-31 Identities = 574/891 (64%), Gaps = 20/891 (2%) Strand=Plus/Minus Query 66089 ATGGTGCCCAAATTCTGTTGATT--ACT-CTTGCGATTGCATGCATCCTTGTACATCATG 66145 ||||| ||||| |||| ||| || ||| |||| || || | ||||||||| | ||| Sbjct 717728 ATGGTACCCAAGTTCTTTTGGTTGGACTTCTTG---TTACAGGAATCCTTGTAAACAATG 717672 Query 66146 TACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTC 66205 | ||||| || || ||| ||| | || | |||||||| ||| | | ||||| Sbjct 717671 AATGGAGTACCAGTTTCAGTTTGRGCTTCTAAGATGGCGTACCACAACTTTTGGGCCTTG 717612 Query 66206 ACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTC 66264 | || | | | || || |||| || || || || || || | |||||| ||| Sbjct 717611 ATGGT-CTTTCTWCCTCTWCCTTCCAACTCATATTGATCATAAAGCTTTTCGAA---TTC 717556 Query 66265 ACC-CCATA--CTTCGGACAGACATGGACACTTGTGT-GGACACATCAGCGACCAATCAC 66320 | | ||||| | || || || |||| ||| | ||| | | || | ||||||| Sbjct 717555 ATCACCATAAGCATCACTCAAACCTGGAG-CTTCACTAGGAGAGAACAAGGTCCAATCAG 717497 Query 66321 CATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATC 66378 ||| || || || | ||| || | ||| || ||||| || || ||| | || Sbjct 717496 CAT--TGGCCTTGACTCTCTTCATGAACAAATCTGGAATCCAAAGRGCTGGGAATAARTC 717439 Query 66379 GCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTC 66438 | |||| || || | ||||| || || | | ||| | ||| |||||||| || Sbjct 717438 TCTGGCTCTGATTTCTTCTTTACCGTGGTTCTTTCTGATGTCAATGAAATCAAAGATATC 717379 Query 66439 GGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTC 66498 | ||||||||||||| ||| | ||| || | || | ||| |||||||| || Sbjct 717378 TGAGTGCCATGGTTCCAAGTACAAGGCAAAGGCACCTGGTCTCTTGTTACCACCTTGATC 717319 Query 66499 GACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCC 66558 || || | ||| ||||||||||| | | ||| || | | || || || | || Sbjct 717318 AACATATCTGGCGGTGTTGTTGAAGACTCTGACCATAGGAATCAAACCATTGGAAGTACC 717259 Query 66559 ATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACC 66618 ||||| || | ||| || || | | || | ||| | | || ||||||||| Sbjct 717258 GTTGGTACCTGCAATGTAAGAACCAGTGGATCTGATGTTGTGGATGTGCAAACCAATACC 717199 Query 66619 ACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGA 66678 ||| || ||||| ||||| |||||| || || || | | || ||||||||||| Sbjct 717198 ACCAGCAGTCTTGGAGATTTGAGCACATTCCTTCAAGGTGTCGTAGATACCGTCAATGGA 717139 Query 66679 GTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGA 66738 ||| |||| || | | | | | || || | ||| ||| | || || |||| Sbjct 717138 GTCGTCCTTCATTGATACCAAGAAACAAGAGGACATTTGAGGTCTTGGAGTACCGGCATT 717079 Query 66739 GAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGAT 66798 ||| | || || | ||||| || ||||| ||||||| | ||||| || || || Sbjct 717078 GAACAAAGTTGGAGAGGCGTGGGTGAAGTATCTTTGAGACATCAAGTTGTAAGTTTCAAT 717019 Query 66799 GACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGG 66858 ||| || |||||||| || ||||| || | ||| || ||| | | || ||| || Sbjct 717018 GACTTTGTCGATGTTTTCACCGTGAATACCAACAGCAACTCTCATGATCAAGTGTTGCGG 716959 Query 66859 CCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACC 66918 | ||| || | | | | ||||| | || || || || | ||||| |||||||| ||| Sbjct 716958 TCTTTCAACGATCTTACCGTTGATCTTCAATAGATAAGATCTTTCCAAGGTCTTGAAACC 716899 Query 66919 AAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCCTCATCAAGGGT 66969 |||||| ||| ||||| || || | | |||||| ||||||| || Sbjct 716898 AAAGTAGTTGTAGTTGAAGTCTCTATCGAAGATGATGGCAGCATCAAGAGT 716848 Score = 100 bits (110), Expect = 2e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521 || |||||||| |||| ||||| || ||||| ||| ||||||||||||| ||| || Sbjct 718349 TACATGTTGGAAGTGAATGGTTCGAAACATTCATTGTAACCTAGAATTTGGGAAGTGGAA 718290 Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGA 65581 ||||||||||| ||||| || ||||| ||||||| || || | | | |||| || | Sbjct 718289 GCAGTTGGCATTGGAGCAACTAACAAGGAGTTTCTTAAACCATGCTTGGCAATCTTCTTC 718230 Query 65582 CGCAATTCGTCCCAGTTCCA 65601 ||||| ||||||| ||| Sbjct 718229 TTTAATTCATCCCAGTCCCA 718210 >seq2 Length=1277918 Score = 140 bits (154), Expect = 3e-28 Identities = 294/439 (67%), Gaps = 5/439 (1%) Strand=Plus/Minus Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 || ||||| |||||||| || || || ||||| ||||| ||||| || | ||| |||| Sbjct 605996 GTKTTGGCCTTCTTTGCTGCCTCTGATGGTATTGTCAAYGAGAACTTGGTTGAAAATTTC 605937 Query 61267 GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326 | || || ||| | | || || |||||||| || ||||| || ||||| Sbjct 605936 TCTGCTGARGTYCAAATTCCAGAAGCCAAGTGTTTCTAYGGTTTCCAAATCATGATGGAA 605877 Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAA 61386 || ||||||| || | ||| | | | || || ||||||| ||| |||| Sbjct 605876 AACATCCACTCAGAAACCTACTCCTTATTGTTGGACACATACATCAAGGACMCTAAGGAA 605817 Query 61387 CGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGG 61446 ||| || ||||||||||| || || || || | | ||| || || || ||| Sbjct 605816 AACGAATTCTTATTCAATGCCATAGAAACCATTCCTGAAATCAAGGAAAAGGCCGAATGG 605757 Query 61447 GCCTTCAATTGGATCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTG 61504 ||| ||| ||||| ||| |||| | || |||| |||| || || | || || | Sbjct 605756 GCCATCAGATGGAT--CCAAGACAAGGACGCCCTGTTTGCTGAAAGACTGGTTGCTTTCG 605699 Query 61505 CGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAAC 61564 | | || |||||||| || ||| ||||| ||||| || ||||| ||||| ||||| Sbjct 605698 CTGCTGTTGAGGGTGTCTTCTTCTCCGGATCATTTGCTGCTATCTTCTGGTTRAAGAAGA 605639 Query 61565 GTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGC 61624 || | ||||| ||| |||||||| ||| |||||||| | | ||||| || | | Sbjct 605638 AAGGTTTGATGCCTGGTTTGACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTAC 605579 Query 61625 ATTGTGATTTTG-CTGTTT 61642 | ||| |||| |||||| Sbjct 605578 ACACTGACTTTGCCTGTTT 605560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567917628880