Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09-
27] 17 sequences; 8,831,957 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq11 96.9 1e-14
>seq11
Length=1501259
Score = 96.9 bits (106), Expect = 1e-14
Identities = 209/314 (67%), Gaps = 4/314 (1%)
Strand=Plus/Plus
Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792
||||||||| | | ||| | ||| || | ||| ||||| ||||| | ||||||||
Sbjct 594281 AACATCGTAGTAAATAACGTGCATACCGAAGGCCTCWGCTAGAACAGATAATTGAGAACC 594340
Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTG--A 12850
||||| ||| ||||| | ||||| | ||| || ||||| ||||| | || ||||
Sbjct 594341 AATGTGACCGTAACCAATAATACCCAAGGTTTTGCCTCTGACTTCCCAACA--CTTGTTG 594398
Query 12851 GAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAA 12910
|| ||||||||| | || ||| || || || ||| || ||||| || | | |
Sbjct 594399 GAGACCTTGTTCCAGGTACCAGTGTGYAGCTCGATGGATCTGTCACCAACTTGTCTGGCA 594458
Query 12911 AGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAA 12970
||| | | || | ||||| | ||| || ||| ||| | ||| | || |||||
Sbjct 594459 AGACAGACAATTTCAGCCATGATCAACTCAGCAACGGATCTGGAGTTRGAGAACGGAGAG 594518
Query 12971 TTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATG 13030
|| ||||| ||| || | ||||| || || | || ||| || | | ||||||
Sbjct 594519 TTGAAGACAGCAGCACCGATYTTGGTGGCGTATTCCAAATCAACYTGGTTGGTACCAATA 594578
Query 13031 CAGAAGCATCCTAT 13044
||||| || || ||
Sbjct 594579 CAGAAACAACCAAT 594592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884885989448181
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |