Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20opuntiae_20[genbank_20GCA_5F001749795.1_202016-09- 27] 17 sequences; 8,831,957 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq11 96.9 1e-14 >seq11 Length=1501259 Score = 96.9 bits (106), Expect = 1e-14 Identities = 209/314 (67%), Gaps = 4/314 (1%) Strand=Plus/Plus Query 12733 AACATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACC 12792 ||||||||| | | ||| | ||| || | ||| ||||| ||||| | |||||||| Sbjct 594281 AACATCGTAGTAAATAACGTGCATACCGAAGGCCTCWGCTAGAACAGATAATTGAGAACC 594340 Query 12793 AATGTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTG--A 12850 ||||| ||| ||||| | ||||| | ||| || ||||| ||||| | || |||| Sbjct 594341 AATGTGACCGTAACCAATAATACCCAAGGTTTTGCCTCTGACTTCCCAACA--CTTGTTG 594398 Query 12851 GAAGTCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAA 12910 || ||||||||| | || ||| || || || ||| || ||||| || | | | Sbjct 594399 GAGACCTTGTTCCAGGTACCAGTGTGYAGCTCGATGGATCTGTCACCAACTTGTCTGGCA 594458 Query 12911 AGATTAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAA 12970 ||| | | || | ||||| | ||| || ||| ||| | ||| | || ||||| Sbjct 594459 AGACAGACAATTTCAGCCATGATCAACTCAGCAACGGATCTGGAGTTRGAGAACGGAGAG 594518 Query 12971 TTAAAGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATG 13030 || ||||| ||| || | ||||| || || | || ||| || | | |||||| Sbjct 594519 TTGAAGACAGCAGCACCGATYTTGGTGGCGTATTCCAAATCAACYTGGTTGGTACCAATA 594578 Query 13031 CAGAAGCATCCTAT 13044 ||||| || || || Sbjct 594579 CAGAAACAACCAAT 594592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884885989448181