Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq6 374 2e-101 >seq6 Length=36437 Score = 374 bits (414), Expect = 2e-101 Identities = 239/259 (92%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 9062 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGATAGCTCGAA 9003 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 9002 TATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC 8943 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 8942 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATT 8883 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 8882 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 8823 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 8822 A-AGAACGAAAGTTAGGGG 8805 Score = 369 bits (408), Expect = 7e-100 Identities = 238/259 (92%), Gaps = 1/259 (0%) Strand=Plus/Plus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 22081 GGCGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGATAGCTCGAA 22140 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 22141 TATATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC 22200 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 22201 ATCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATT 22260 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 ||||||| |||||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct 22261 CTTGGATATATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATC 22320 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 22321 A-AGAACGAAAGTTAGGGG 22338 Score = 315 bits (348), Expect = 1e-83 Identities = 226/259 (87%), Gaps = 1/259 (0%) Strand=Plus/Minus Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 || || ||||||||||||| ||||||||||||||||||||| ||||||| | ||||||| Sbjct 266 GGCGAACCAGGACTTTTACATTGAAAAAATTAGAGTGTTCATAGCAGGCGATAGCTCGAA 207 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct 206 TATATTAGCATGGAATAATAGAATAAAACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC 147 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||| ||||||||| |||||||| |||| | |||| |||||||| |||||| Sbjct 146 ATCGTAATGAGTAATAGGGACGGTCGGGGGCATCAGCAGTCAAGGGTCAGAGGGGAAATT 87 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||| ||||||||||||||||||||||||||| | ||||||| ||||| ||||||| Sbjct 86 CTTGGAGTTATTGAAGACTAACTACTGCGAAAGCAGTTGCCAAGGACGTTTTGATTAATC 27 Query 300 AGTGAACGAAAGTTAGGGG 318 | |||||||||||||||| Sbjct 26 A-AGAACGAAAGTTAGGGG 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199844416