Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6 322 8e-86 >seq6 Length=36437 Score = 322 bits (356), Expect = 8e-86 Identities = 230/260 (88%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 8304 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 8363 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG--CCAG 119 |||||||||||||||||||||||| | || ||| | ||||||||||||||||| | | Sbjct 8364 CCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTTCAAA 8423 Query 120 CCACCAACCATAGTCGA-TGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 | | ||| | || || | | ||||||| |||||||||||||||||||||||| ||| Sbjct 8424 CGAGCAA--AAAGCCGCGTAGAACTATTTAA-AGGTTAAGGTCTCGTTCGTTATCGCAAT 8480 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 8481 TAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAA 8540 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 8541 GAAAGAGCTCTCAATCTGTC 8560 Score = 316 bits (350), Expect = 3e-84 Identities = 228/260 (88%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 20120 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 20179 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG--CCAG 119 |||||||||||||||||||||||| | || ||| | ||||||||||||||||| | | Sbjct 20180 CCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTTCAAA 20239 Query 120 CCACCAACCATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 | | ||| | || || | | ||||||| |||||||||||||||||||||||| ||| Sbjct 20240 CGAGCAA--AAAGCCGCGTAGAACTATTTA-AAGGTTAAGGTCTCGTTCGTTATCGCAAT 20296 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| | ||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 20297 TAAGCMGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACACAATCAA 20356 Query 239 GAAAGAGCTATCAATCTGTC 258 | ||||||| |||||||||| Sbjct 20357 GMAAGAGCTCTCAATCTGTC 20376 Score = 316 bits (350), Expect = 3e-84 Identities = 229/260 (88%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 22839 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 22780 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG--CCAG 119 |||||||||||||||||||||||| | || ||| | ||||||||||||||||| | | Sbjct 22779 CCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTTCAAA 22720 Query 120 CCACCAACCATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 | | ||| | || || | | ||||||| |||||||||||||||||||||||| ||| Sbjct 22719 CGAGCAA--AAAGCCGCGTAGAACTATTTA-AAGGTTAAGGTCTCGTTCGTTATCGCAAT 22663 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | | |||| Sbjct 22662 TAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAACTCAA 22603 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 22602 GAAAGAGCTCTCAATCTGTC 22583 Score = 291 bits (322), Expect = 1e-76 Identities = 223/260 (86%), Gaps = 7/260 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 30331 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 30272 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG--CCAG 119 |||||||||||||||||||||||| | || ||| | ||||||||||||||||| | | Sbjct 30271 CCTGTTATTGCCTCAAACTTCCATCGACTTGAAATCGATAGTCCCTCTAAGAAGTTCAAA 30212 Query 120 CCACCAACCATAGTCG-ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 | | ||| | || || | | ||||| | ||||||| | ||||||||||||| ||| Sbjct 30211 CGAGCAA--AAAGCCGCGTAGAACTATTAA--AGGTTAAAGGTTCGTTCGTTATCGCAAT 30156 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| |||||||||||||||||||||||| |||||||| ||||||||||||| | || ||| Sbjct 30155 TAAGCAGACAAATCACTCCACCAACTAAAAACGGCCAAGCACCACCACCCACAAAAACAA 30096 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 30095 GAAAGAGCTCTCAATCTGTC 30076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799868777