Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq6 104 1e-20 >seq6 Length=36437 Score = 104 bits (114), Expect = 1e-20 Identities = 80/90 (89%), Gaps = 4/90 (4%) Strand=Plus/Plus Query 35 CAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTAC 94 ||| |||| ||| |||||||||||||| || |||||| || ||||||||||| |||||| Sbjct 8108 CAAATCCGGAAGC-CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTAC 8164 Query 95 AAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||| ||||||||||| Sbjct 8165 AAAGGGCAGGGACGTAAT-CAACGCAAGCT 8193 Score = 104 bits (114), Expect = 1e-20 Identities = 80/90 (89%), Gaps = 4/90 (4%) Strand=Plus/Plus Query 35 CAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTAC 94 ||| |||| ||| |||||||||||||| || |||||| || ||||||||||| |||||| Sbjct 19924 CAAATCCGGAAGC-CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTAC 19980 Query 95 AAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||| ||||||||||| Sbjct 19981 AAAGGGCAGGGACGTAAT-CAACGCAAGCT 20009 Score = 100 bits (110), Expect = 2e-19 Identities = 79/90 (88%), Gaps = 4/90 (4%) Strand=Plus/Minus Query 35 CAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTAC 94 ||| |||| ||| |||||||||||||| || |||||| || ||||||||||| |||||| Sbjct 30527 CAAATCCGGAAGC-CTCACTAAGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTAC 30471 Query 95 AAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||| ||||| ||||| Sbjct 30470 AAAGGGCAGGGACGTAAT-CAACGHAAGCT 30442 Score = 98.7 bits (108), Expect = 6e-19 Identities = 79/90 (88%), Gaps = 4/90 (4%) Strand=Plus/Minus Query 35 CAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTAC 94 ||| |||| ||| ||||||| |||||| || |||||| || ||||||||||| |||||| Sbjct 23035 CAAATCCGGAAGC-CTCACTAGGCCATT-CAATCGGTACTA-GCGACGGGCGGTGTGTAC 22979 Query 95 AAAGGGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||||||| ||||||||||| Sbjct 22978 AAAGGGCAGGGACGTAAT-CAACGCAAGCT 22950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799952060