Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq6 356 4e-96 >seq6 Length=36437 Score = 356 bits (394), Expect = 4e-96 Identities = 272/314 (87%), Gaps = 11/314 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAG--CCAGGCCCGCTTTGGCGGGTCGCCGG--CTTC 75 || |||||||||||||| ||||||| | | | | ||||| | ||| | |||| Sbjct 8469 GAACGAGACCTTAACCT-TTAAATAGTTCTACG-CGGCTTT--TTGCTCGTTTGAACTTC 8414 Query 76 TTAGAGGGACTATCG-GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 8413 TTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 8354 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 ||||||| ||||||||||||||||||||||||||||| |||||| ||||| || |||| Sbjct 8353 CCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTGTAT--CCTT 8296 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 || || || |||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 8295 GGTCGAGAGACCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAAT 8236 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 ||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| Sbjct 8235 TATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGT 8176 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 8175 CCCTGCCCTTTGTA 8162 Score = 356 bits (394), Expect = 4e-96 Identities = 272/314 (87%), Gaps = 11/314 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAG--CCAGGCCCGCTTTGGCGGGTCGCCGG--CTTC 75 || |||||||||||||| ||||||| | | | | ||||| | ||| | |||| Sbjct 20285 GAACGAGACCTTAACCT-TTAAATAGTTCTACG-CGGCTTT--TTGCTCGTTTGAACTTC 20230 Query 76 TTAGAGGGACTATCG-GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 20229 TTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 20170 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 ||||||| ||||||||||||||||||||||||||||| |||||| ||||| || |||| Sbjct 20169 CCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTGTAT--CCTT 20112 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 || || || |||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 20111 GGTCGAGAGACCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAAT 20052 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 ||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||| Sbjct 20051 TATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGT 19992 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 19991 CCCTGCCCTTTGTA 19978 Score = 356 bits (394), Expect = 4e-96 Identities = 235/258 (91%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct 22726 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 22785 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||| Sbjct 22786 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTGTATC- 22844 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||| || || |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 22845 -CTTGGTCGAGAGACCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 22903 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 22904 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 22963 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 22964 ACGTCCCTGCCCTTTGTA 22981 Score = 352 bits (390), Expect = 5e-95 Identities = 234/258 (91%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct 30218 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 30277 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||| Sbjct 30278 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTGTATC- 30336 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||| || || |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 30337 -CTTGGTCGAGAGACCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 30395 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| Sbjct 30396 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTDCGTTGATT 30455 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 30456 ACGTCCCTGCCCTTTGTA 30473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199838976