Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq6 356 4e-96
>seq6
Length=36437
Score = 356 bits (394), Expect = 4e-96
Identities = 272/314 (87%), Gaps = 11/314 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAG--CCAGGCCCGCTTTGGCGGGTCGCCGG--CTTC 75
|| |||||||||||||| ||||||| | | | | ||||| | ||| | ||||
Sbjct 8469 GAACGAGACCTTAACCT-TTAAATAGTTCTACG-CGGCTTT--TTGCTCGTTTGAACTTC 8414
Query 76 TTAGAGGGACTATCG-GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 8413 TTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 8354
Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194
||||||| ||||||||||||||||||||||||||||| |||||| ||||| || ||||
Sbjct 8353 CCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTGTAT--CCTT 8296
Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254
|| || || |||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 8295 GGTCGAGAGACCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAAT 8236
Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314
||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct 8235 TATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGT 8176
Query 315 CCCTGCCCTTTGTA 328
||||||||||||||
Sbjct 8175 CCCTGCCCTTTGTA 8162
Score = 356 bits (394), Expect = 4e-96
Identities = 272/314 (87%), Gaps = 11/314 (4%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAG--CCAGGCCCGCTTTGGCGGGTCGCCGG--CTTC 75
|| |||||||||||||| ||||||| | | | | ||||| | ||| | ||||
Sbjct 20285 GAACGAGACCTTAACCT-TTAAATAGTTCTACG-CGGCTTT--TTGCTCGTTTGAACTTC 20230
Query 76 TTAGAGGGACTATCG-GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 20229 TTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 20170
Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194
||||||| ||||||||||||||||||||||||||||| |||||| ||||| || ||||
Sbjct 20169 CCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTGTAT--CCTT 20112
Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254
|| || || |||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 20111 GGTCGAGAGACCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGCAAT 20052
Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314
||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct 20051 TATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGT 19992
Query 315 CCCTGCCCTTTGTA 328
||||||||||||||
Sbjct 19991 CCCTGCCCTTTGTA 19978
Score = 356 bits (394), Expect = 4e-96
Identities = 235/258 (91%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct 22726 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 22785
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |||
Sbjct 22786 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTGTATC- 22844
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||| || || |||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 22845 -CTTGGTCGAGAGACCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 22903
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct 22904 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 22963
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 22964 ACGTCCCTGCCCTTTGTA 22981
Score = 352 bits (390), Expect = 5e-95
Identities = 234/258 (91%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct 30218 CTTCTTAGAGGGACTATCGATTTCAAGTCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 30277
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| |||
Sbjct 30278 ATGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTGTATC- 30336
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||||| || || |||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 30337 -CTTGGTCGAGAGACCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTG 30395
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||
Sbjct 30396 CAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTDCGTTGATT 30455
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 30456 ACGTCCCTGCCCTTTGTA 30473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199838976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |