Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq6 771 0.0
>seq6
Length=36437
Score = 771 bits (854), Expect = 0.0
Identities = 497/539 (92%), Gaps = 6/539 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4653 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 4712
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 4713 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 4772
Query 127 GGCCCGCGAAGGACCTTAAC-GCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||| | || ||| |||| || |||| ||| |||| ||| |||||||| ||||
Sbjct 4773 AGCCTGTAAAAGACTTTAAATGCTAGAAGGTGGAAAATGAATTCCAATTCCGCTTAATTG 4832
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 4833 AATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTT 4889
Query 246 ATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|| ||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 4890 ATGCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 4948
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 4949 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 5008
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5009 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 5068
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5069 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 5128
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5129 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 5187
Score = 771 bits (854), Expect = 0.0
Identities = 497/539 (92%), Gaps = 6/539 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 13451 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 13510
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 13511 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 13570
Query 127 GGCCCGCGAAGGACCTTAAC-GCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||| | || ||| |||| || |||| ||| |||| ||| |||||||| ||||
Sbjct 13571 AGCCTGTAAAAGACTTTAAATGCTAGAAGGTGGAAAATGAATTCCAATTCCGCTTAATTG 13630
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 13631 AATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTT 13687
Query 246 ATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|| ||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 13688 ATGCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 13746
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 13747 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 13806
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13807 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 13866
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13867 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 13926
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13927 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 13985
Score = 771 bits (854), Expect = 0.0
Identities = 497/539 (92%), Gaps = 6/539 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 16469 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 16528
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 16529 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 16588
Query 127 GGCCCGCGAAGGACCTTAAC-GCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||| | || ||| |||| || |||| ||| |||| ||| |||||||| ||||
Sbjct 16589 AGCCTGTAAAAGACTTTAAATGCTAGAAGGTGGAAAATGAATTCCAATTCCGCTTAATTG 16648
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 16649 AATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTT 16705
Query 246 ATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|| ||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 16706 ATGCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 16764
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 16765 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 16824
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16825 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 16884
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16885 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 16944
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 16945 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 17003
Score = 771 bits (854), Expect = 0.0
Identities = 497/539 (92%), Gaps = 6/539 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 26490 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 26431
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 26430 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 26371
Query 127 GGCCCGCGAAGGACCTTAAC-GCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||| | || ||| |||| || |||| ||| |||| ||| |||||||| ||||
Sbjct 26370 AGCCTGTAAAAGACTTTAAATGCTAGAAGGTGGAAAATGAATTCCAATTCCGCTTAATTG 26311
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 26310 AATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTT 26254
Query 246 ATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|| ||||||| ||| | ||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 26253 ATGCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 26195
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 26194 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 26135
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 26134 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 26075
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 26074 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 26015
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 26014 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 25956
Score = 765 bits (848), Expect = 0.0
Identities = 496/539 (92%), Gaps = 6/539 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 33982 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 33923
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 33922 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 33863
Query 127 GGCCCGCGAAGGACCTTAAC-GCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||| | || ||| |||| || |||| ||| |||| ||| |||||||| ||||
Sbjct 33862 AGCCTGTAAAAGACTTTAAATGCTAGAAGGTGGAAAATGAATTCCAATTCCGCTTAATTG 33803
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 33802 AATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTT 33746
Query 246 ATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|| ||||||| ||| | ||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 33745 ATGCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 33687
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 33686 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGC 33627
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33626 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 33567
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33566 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 33507
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 33506 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 33448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635199722016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |