Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq6 206 4e-51
>seq6
Length=36437
Score = 206 bits (228), Expect = 4e-51
Identities = 226/293 (77%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| |
Sbjct 4329 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 4272
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 4271 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 4212
Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170
||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | |
Sbjct 4211 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 4152
Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
| | ||||| |||||||| |||||||| || |||||| || ||| |||
Sbjct 4151 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 4093
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| || |||||||||| ||| |||| ||||||||| |||| | |||||
Sbjct 4092 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 4040
Score = 206 bits (228), Expect = 4e-51
Identities = 226/293 (77%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| |
Sbjct 13127 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 13070
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 13069 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 13010
Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170
||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | |
Sbjct 13009 GAAAGCGATGATTTCTTTCCCTCACACATWTTAGATGGATAAGAATAAGGTGCATTTATT 12950
Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
| | ||||| |||||||| |||||||| || |||||| || ||| |||
Sbjct 12949 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 12891
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| || |||||||||| ||| |||| ||||||||| |||| | |||||
Sbjct 12890 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 12838
Score = 206 bits (228), Expect = 4e-51
Identities = 226/293 (77%), Gaps = 18/293 (6%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| |
Sbjct 26814 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 26871
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 26872 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 26931
Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170
||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | |
Sbjct 26932 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 26991
Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
| | ||||| |||||||| |||||||| || |||||| || ||| |||
Sbjct 26992 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 27050
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| || |||||||||| ||| |||| ||||||||| |||| | |||||
Sbjct 27051 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 27103
Score = 206 bits (228), Expect = 4e-51
Identities = 226/293 (77%), Gaps = 18/293 (6%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| |
Sbjct 34306 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 34363
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 34364 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 34423
Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170
||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | |
Sbjct 34424 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 34483
Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
| | ||||| |||||||| |||||||| || |||||| || ||| |||
Sbjct 34484 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 34542
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| || |||||||||| ||| |||| ||||||||| |||| | |||||
Sbjct 34543 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 34595
Score = 183 bits (202), Expect = 5e-44
Identities = 217/293 (74%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||| ||||| | | |||||| |||||||||||||| ||||||| | || ||| |
Sbjct 16145 GTACGAGWGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCKGCTGTCTKATCAKGCATT 16088
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||| | ||| || | ||||||||||||||||||||||||||||||| |
Sbjct 16087 GCCGCGAAGCTACCAYCYGCTSGAYTMTGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 16028
Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170
||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | |
Sbjct 16027 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 15968
Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
| | ||||| |||||||| |||||||| || |||||| || ||| |||
Sbjct 15967 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 15909
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| || |||||||||| ||| |||| ||||||||| |||| | |||||
Sbjct 15908 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 15856
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199865088
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