Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq6 206 4e-51 >seq6 Length=36437 Score = 206 bits (228), Expect = 4e-51 Identities = 226/293 (77%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| | Sbjct 4329 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 4272 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 4271 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 4212 Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170 ||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | | Sbjct 4211 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 4152 Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 | | ||||| |||||||| |||||||| || |||||| || ||| ||| Sbjct 4151 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 4093 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || || |||||||||| ||| |||| ||||||||| |||| | ||||| Sbjct 4092 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 4040 Score = 206 bits (228), Expect = 4e-51 Identities = 226/293 (77%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| | Sbjct 13127 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 13070 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 13069 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 13010 Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170 ||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | | Sbjct 13009 GAAAGCGATGATTTCTTTCCCTCACACATWTTAGATGGATAAGAATAAGGTGCATTTATT 12950 Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 | | ||||| |||||||| |||||||| || |||||| || ||| ||| Sbjct 12949 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 12891 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || || |||||||||| ||| |||| ||||||||| |||| | ||||| Sbjct 12890 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 12838 Score = 206 bits (228), Expect = 4e-51 Identities = 226/293 (77%), Gaps = 18/293 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| | Sbjct 26814 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 26871 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 26872 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 26931 Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170 ||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | | Sbjct 26932 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 26991 Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 | | ||||| |||||||| |||||||| || |||||| || ||| ||| Sbjct 26992 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 27050 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || || |||||||||| ||| |||| ||||||||| |||| | ||||| Sbjct 27051 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 27103 Score = 206 bits (228), Expect = 4e-51 Identities = 226/293 (77%), Gaps = 18/293 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| | Sbjct 34306 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 34363 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 34364 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 34423 Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170 ||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | | Sbjct 34424 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 34483 Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 | | ||||| |||||||| |||||||| || |||||| || ||| ||| Sbjct 34484 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 34542 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || || |||||||||| ||| |||| ||||||||| |||| | ||||| Sbjct 34543 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 34595 Score = 183 bits (202), Expect = 5e-44 Identities = 217/293 (74%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||| ||||| | | |||||| |||||||||||||| ||||||| | || ||| | Sbjct 16145 GTACGAGWGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCKGCTGTCTKATCAKGCATT 16088 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||| | ||| || | ||||||||||||||||||||||||||||||| | Sbjct 16087 GCCGCGAAGCTACCAYCYGCTSGAYTMTGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 16028 Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170 ||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | | Sbjct 16027 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 15968 Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 | | ||||| |||||||| |||||||| || |||||| || ||| ||| Sbjct 15967 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 15909 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || || |||||||||| ||| |||| ||||||||| |||| | ||||| Sbjct 15908 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 15856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199865088