Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq6 720 0.0
>seq6
Length=36437
Score = 720 bits (798), Expect = 0.0
Identities = 469/509 (92%), Gaps = 10/509 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||| || |||||||||| ||||||||||||||||||
Sbjct 9269 GTACTCATTCCAATTACAAGACC---AATGGCCCTGTATCGTTATTTATTGTCACTACCT 9325
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 9326 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 9385
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 9386 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 9445
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 9446 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 9505
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| |
Sbjct 9506 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 9563
Query 301 TTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357
||||||||||||||||||| ||||||| ||||||| |||| |||||||||||||||
Sbjct 9564 TTTTTATCTAATAAATACATCCCTTCCATAACAGTCGGGATTTTAAGCATGTATTAGCTC 9623
Query 358 TAGAATTACCAC-GGTTATCCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTT 415
|||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||
Sbjct 9624 TAGAATTACCACAGGTATTCCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTT 9683
Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 9684 AATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAAT 9743
Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||
Sbjct 9744 CTTTGAGACAAGCATATGACTACTGGCAG 9772
Score = 720 bits (798), Expect = 0.0
Identities = 469/509 (92%), Gaps = 10/509 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||| || |||||||||| ||||||||||||||||||
Sbjct 21874 GTACTCATTCCAATTACAAGACC---AATGGCCCTGTATCGTTATTTATTGTCACTACCT 21818
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21817 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 21758
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 21757 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 21698
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 21697 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 21638
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| |
Sbjct 21637 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 21580
Query 301 TTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357
||||||||||||||||||| ||||||| ||||||| |||| |||||||||||||||
Sbjct 21579 TTTTTATCTAATAAATACATCCCTTCCATAACAGTCGGGATTTTAAGCATGTATTAGCTC 21520
Query 358 TAGAATTACCAC-GGTTATCCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTT 415
|||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||
Sbjct 21519 TAGAATTACCACAGGTATTCCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTT 21460
Query 416 AATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAAT 475
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 21459 AATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAAT 21400
Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||
Sbjct 21399 CTTTGAGACAAGCATATGACTACTGGCAG 21371
Score = 691 bits (766), Expect = 0.0
Identities = 454/510 (89%), Gaps = 8/510 (2%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| |||| || ||||||| |||||||||||||| |||
Sbjct 473 GTACTCATTCCAATTACAAGACCCGAAAGGGCSCTGTATCGTTATTTATTGTCACTMCCT 532
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | | ||||||||| ||||||||||||||||||||||||| ||||||| ||||||
Sbjct 533 CCCYGWRTYRGGATTGGGTMATTTGCGCGCCTGCTGCCTTCCTTGKATGTGGTRGCCGTT 592
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||
Sbjct 593 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCRTGGTA 652
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct 653 GGCCACTATCCTACCATCGAAARTTGATAGGKCAGAAATTTGAATGAACCATCGCMAGCA 712
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| |
Sbjct 713 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGMT 770
Query 301 TTTTTATCTAATAAATACACCCCTTCC---GAAGTCGGGGTTTTTAGCATGTATTAGCTC 357
|||||| |||||||||||| ||||||| ||| ||| |||| ||||||||||||||
Sbjct 771 TTTTTAWCTAATAAATACAWCCCTTCCATAACAGTMGGGATTTTAAGCATGTATTAGCTS 830
Query 358 TAGAATTACCA--CGGTTATCCATGTAGTAA-GGTACTATCAAATAAACGATAACTGATT 414
|| || || ||| |||||||||||| || |||||||||||||||||||||||||
Sbjct 831 TAKAAKWRMCAGCAGGTATTCCATGTAGTAAWGGAACTATCAAATAAACGATAACTGATT 890
Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 891 TAATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAA 950
Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||
Sbjct 951 TCTTTGAGACAAGCATATGACTACTGGCAG 980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510399743232
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