Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq14 114 4e-21
>seq14
Length=1659880
Score = 114 bits (126), Expect = 4e-21
Identities = 345/521 (66%), Gaps = 33/521 (6%)
Strand=Plus/Minus
Query 1708 GACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGGT 1767
||||| | ||||||||||| ||||||| ||| || ||| || |||| ||| |
Sbjct 159827 GACTCCAGAGGTAACCCAACTGTTGAAGTTGAARTTACCACCAAAGATGGTATGTTCAGA 159768
Query 1768 CGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGAT 1827
| || ||||| || || || || |||||| |||||||| | ||| | | |||
Sbjct 159767 TCC---ATTGTTCCATCTGGTGCTTCCACTGGTATCCACGAAGCTTTGGAATTGAGAGAT 159711
Query 1828 GGTGACAAAGCTCGTTACGGT--GGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACA 1885
|| |||||| || | ||| ||| ||| | ||||| |||| |||||| |||
Sbjct 159710 GGGGACAAA--TCCAAATGGTTGGGTAAAGGTGTTTTGAAAGCCGTTGCTAACGTTAACG 159653
Query 1886 ACGTTATTGCTG-AGC----ACATCATC-GGATTCGACGTACGTGATCAACAAGGTATTG 1939
|| |||||| ||| || || || || || || || ||| ||| ||| | |||
Sbjct 159652 ACACCATTGCTCCAGCTTTGACCTCTTCTGGTTTGGATGTTGCTGACCAAGAAGCTGTTG 159593
Query 1940 ACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTA 1999
| ||||| | || |||||||||||||||| |||| | ||||| |||||||
Sbjct 159592 ATGCTTTCTTGATCAAATTGGATGGTACTCCAAACAAAGCTAAATTGGGTGCTAACGCTA 159533
Query 2000 TTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGAA-GTTCCACTT 2058
|| | ||||| || || ||||| | || ||||||| || || || |||||| |
Sbjct 159532 TTTTGGGTGTTTCCATGGCTGTTTCTAAAGCTGCTGCTG-CTGCCAAAAACGTTCCATTG 159474
Query 2059 TAC-AGC-----TACC--TTGGC---GGATTC-----AACACTAA--AGTTCTTCCAACT 2100
||| | | ||| ||||| | ||| ||||| | ||| | ||| |
Sbjct 159473 TACGAACACTTGAACCAATTGGCTTACGGTTCTACCAAACACCCATTGGTTTTGCCAGTT 159414
Query 2101 CCAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGAA 2160
||| | ||||| | | ||||||||||||||| | | | | | | ||||| ||||||
Sbjct 159413 CCATTTTTGAACGTTTTGAACGGTGGTTCTCACGCTGGTGGTGCTTTGGCTTTGCAAGAA 159354
Query 2161 TTTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGC 2201
|||||||||| || ||||||| ||| | ||| |||||
Sbjct 159353 TTTATGATTGCTCCAACTGGTGCTCCATCTTTCTCTGAAGC 159313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156038368499748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |