Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq14 114 4e-21 >seq14 Length=1659880 Score = 114 bits (126), Expect = 4e-21 Identities = 345/521 (66%), Gaps = 33/521 (6%) Strand=Plus/Minus Query 1708 GACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGGT 1767 ||||| | ||||||||||| ||||||| ||| || ||| || |||| ||| | Sbjct 159827 GACTCCAGAGGTAACCCAACTGTTGAAGTTGAARTTACCACCAAAGATGGTATGTTCAGA 159768 Query 1768 CGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGAT 1827 | || ||||| || || || || |||||| |||||||| | ||| | | ||| Sbjct 159767 TCC---ATTGTTCCATCTGGTGCTTCCACTGGTATCCACGAAGCTTTGGAATTGAGAGAT 159711 Query 1828 GGTGACAAAGCTCGTTACGGT--GGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACA 1885 || |||||| || | ||| ||| ||| | ||||| |||| |||||| ||| Sbjct 159710 GGGGACAAA--TCCAAATGGTTGGGTAAAGGTGTTTTGAAAGCCGTTGCTAACGTTAACG 159653 Query 1886 ACGTTATTGCTG-AGC----ACATCATC-GGATTCGACGTACGTGATCAACAAGGTATTG 1939 || |||||| ||| || || || || || || || ||| ||| ||| | ||| Sbjct 159652 ACACCATTGCTCCAGCTTTGACCTCTTCTGGTTTGGATGTTGCTGACCAAGAAGCTGTTG 159593 Query 1940 ACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTA 1999 | ||||| | || |||||||||||||||| |||| | ||||| ||||||| Sbjct 159592 ATGCTTTCTTGATCAAATTGGATGGTACTCCAAACAAAGCTAAATTGGGTGCTAACGCTA 159533 Query 2000 TTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGAA-GTTCCACTT 2058 || | ||||| || || ||||| | || ||||||| || || || |||||| | Sbjct 159532 TTTTGGGTGTTTCCATGGCTGTTTCTAAAGCTGCTGCTG-CTGCCAAAAACGTTCCATTG 159474 Query 2059 TAC-AGC-----TACC--TTGGC---GGATTC-----AACACTAA--AGTTCTTCCAACT 2100 ||| | | ||| ||||| | ||| ||||| | ||| | ||| | Sbjct 159473 TACGAACACTTGAACCAATTGGCTTACGGTTCTACCAAACACCCATTGGTTTTGCCAGTT 159414 Query 2101 CCAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGAA 2160 ||| | ||||| | | ||||||||||||||| | | | | | | ||||| |||||| Sbjct 159413 CCATTTTTGAACGTTTTGAACGGTGGTTCTCACGCTGGTGGTGCTTTGGCTTTGCAAGAA 159354 Query 2161 TTTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGC 2201 |||||||||| || ||||||| ||| | ||| ||||| Sbjct 159353 TTTATGATTGCTCCAACTGGTGCTCCATCTTTCTCTGAAGC 159313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156038368499748