Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1 618 2e-174 >seq1 Length=1362551 Score = 618 bits (684), Expect = 2e-174 Identities = 540/659 (82%), Gaps = 17/659 (3%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| ||||||||||||||||||||||||||| || |||| |||||||| | ||| ||| Sbjct 306661 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTCAAG 306720 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA-C 152 |||||||||||| |||||||||||||| ||||||| |||||| |||||||| |||| | | Sbjct 306721 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGGAAAGGAAC 306780 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212 |||| ||||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 306781 TTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGAC 306840 Query 213 TTGCCCGCAGTTGC-TCAACCGGCCCCTCG---GCCGGTGCACTCTT-CTGCGGTCA--- 264 || |||| | || ||| |||| || | || |||| | ||| Sbjct 306841 ATGGTGTTTTTTGCATGCACTCGCCTCTCGTGGGCTTGGGC-CTCTCACAAATTTCACTG 306899 Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324 ||||| ||||| || ||| | ||||||| | |||||| || | ||||| | Sbjct 306900 GGCCAACATCAATTCTGGCAGCAGGATAAAT-CATTAAGAATGTAGCTAC-TTCGGTAG- 306956 Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGAT 384 ||||||||| |||||| | | ||| ||| ||||| | ||||| |||| ||||| Sbjct 306957 TGTTATAGCTTTT--TGGAATACTGTTAGCCGGGATTGAGGGCTGCGCTTCGGCAAGGAT 307014 Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTA 444 | |||| |||||||| | || |||||||||| |||||||||||||||||||||| |||| Sbjct 307015 GTTGGCATAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTA 307074 Query 445 TGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 ||||||||||||||||| |||||||| ||||||||||||||||||| |||| || || Sbjct 307075 TGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGGCC-- 307132 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 | |||||||| ||||||||| | |||||| ||||||| | ||||||||||||||||||| Sbjct 307133 TTCGGGTGCACAATCGACCGACCTTGATGTTTTCGGATAGGTTTGAGTAAGAGCATAGCT 307192 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 307193 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 307252 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 307253 TGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 307311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999120550