Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1 239 5e-61 seq32 132 5e-29 >seq1 Length=1362551 Score = 239 bits (264), Expect = 5e-61 Identities = 167/189 (88%), Gaps = 1/189 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATA 60 || |||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||| Sbjct 304600 GATCCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 304659 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 304660 TATTAGCATGGAATAATAGAATAGGACGATTGGTTCTATTTTGTTGGTTTCTAGGACCAA 304719 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| |||||||| |||||||||| |||||| ||||||||||| Sbjct 304720 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTC 304779 Query 181 TTGGATTTA 189 ||||||||| Sbjct 304780 TTGGATTTA 304788 >seq32 Length=573 Score = 132 bits (146), Expect = 5e-29 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATG 70 || |||||||||| ||||||||| | ||||||||||||| ||| | |||||||| |||| Sbjct 180 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAGGCCTACGCTTGTATACATTAGCATG 239 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 | |||| | |||||| | || | ||||| ||| || | ||| || |||||||| Sbjct 240 GGATAACATCATAGGA-TTTCGATCCTATTCTGTTGGCCTTCGGGATCG-GAGTAATGAT 297 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 298 TAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999796640