Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1 212 1e-52
>seq1
Length=1362551
Score = 212 bits (234), Expect = 1e-52
Identities = 228/293 (78%), Gaps = 19/293 (6%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| |
Sbjct 309411 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 309468
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 309469 GCCGCGAAGCTACCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 309528
Query 121 GAACGGGGTGATTCTCT--CCTGCACATCGTAGTCGGATACGAATAGG-----CTT---- 169
||| | | ||||| | | | | |||||| ||| ||||||||||| | |||
Sbjct 309529 GAAAGCGATGATTTTTTGCCTTACACATCATAGATGGATACGAATAAGGTGTTCTTGTAG 309588
Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCC--CGCGGAA--GCGCGGGGCGCTC 225
| | | ||||| |||||||| |||||| ||||| | ||||| | ||||| |
Sbjct 309589 CACCGCTGAACCATAGCAGGCTGGCAAC-GGCGTTCTTTCCGGAAAGGGATTGGGCG-TT 309646
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| | |||||||| ||| |||| ||||||||| |||| | |||||
Sbjct 309647 TGCTGGTGAATTGCAATGTCATTTTGCGTGAGGATAAATCATTTGTAAACGAC 309699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199674624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |