Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4 167 2e-36 seq13 120 2e-22 >seq4 Length=144043 Score = 167 bits (184), Expect = 2e-36 Identities = 552/853 (65%), Gaps = 4/853 (0%) Strand=Plus/Minus Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 || || ||||| |||| ||||||| || ||| || ||||||||||| | ||| | Sbjct 46192 ATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAA 46133 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 ||||| || || || ||||| || | |||||||| ||| | | ||||| | Sbjct 46132 GGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATG 46073 Query 66209 GTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 || | | | || ||||||| |||||| || || || || | ||| ||| ||||| Sbjct 46072 GT-CTTTCTACCTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACC 46014 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGT-GGACACATCAGCGACCAATCACCATCCT 66326 | | || || || ||| ||| | ||| | | | | ||||||||||| Sbjct 46013 ATAAGCATCACTCAAACCAGGAG-CTTCACTAGGAGAGAATAAAGTCCAATCACCATTTG 45955 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 | || | ||| || | ||||| ||||| | || ||| | ||| | |||| Sbjct 45954 CCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTC 45895 Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 || || | ||||||||||| | | ||||| ||| |||||||| || | |||| Sbjct 45894 TGATTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCC 45835 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 ||||||| ||||| | || || | || | |||| |||||||| || ||||| | Sbjct 45834 ATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATC 45775 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 || |||||||| || | | ||| |||| | || || || | |||||||| | Sbjct 45774 TGGCAGTGTTGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTAC 45715 Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626 | | ||| || || | | || | ||||| | | ||||||||||||||| | Sbjct 45714 CAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAG 45655 Query 66627 TCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 |||| || || |||||| || | || | || |||||||| || ||| ||| Sbjct 45654 TCTTAGAAATTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCT 45595 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | || | | | | | || ||| | ||| ||| | || || | || ||| || | Sbjct 45594 TCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTG 45535 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||| || |||||||| ||||||| | ||||| || |||||||| | Sbjct 45534 TTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTT 45475 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866 |||||||||| || || || || | ||| || ||| | | | ||| || | ||| | Sbjct 45474 CAATGTTTTCACCGTGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAA 45415 Query 66867 CCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACG 66926 | | | | | ||||| | || |||||| || | ||||| ||||||| |||||| || Sbjct 45414 CGATCTTACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGT 45355 Query 66927 AGTAATTGAAATC 66939 ||| |||||||| Sbjct 45354 TGTAGTTGAAATC 45342 Score = 96.9 bits (106), Expect = 3e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521 || ||||| || |||| |||||||| ||||| ||| |||| |||||||| |||||| Sbjct 46813 TACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTAACCTAAAATTTGGGAAGTAGAA 46754 Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTT 65577 ||||||||||| ||||| ||||| || ||||||| || |||| | | |||| || Sbjct 46753 GCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCTT 46698 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 67061 GTCTGCTTGTGCATGTTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATGT 67120 || |||||||| | ||| ||||||||| | |||||| || ||| ||||||| ||||| Sbjct 45193 GTTTGCTTGTGTAAGTTACTGATGGCGATTCTGGCGGCAAGAACAGCATAATCAGGATGA 45134 Query 67121 AGAGTCATCATACTGGCGGCAGTTTCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCACA 67180 | ||| |||| ||| |||||||||||| ||| |||| | ||| |||||| ||| Sbjct 45133 ACAGTGGTCATGTAGGCACAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACA 45074 Query 67181 CC 67182 || Sbjct 45073 CC 45072 >seq13 Length=415809 Score = 120 bits (132), Expect = 2e-22 Identities = 349/534 (65%), Gaps = 5/534 (1%) Strand=Plus/Minus Query 61108 GCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGG 61167 || |||||||| |||||||| | || || |||||||||| || || | | || ||| Sbjct 173860 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATCGATTTGTCTAAGGATTTACACGATTGG 173801 Query 61168 GAGCGTTTATCGAGCGG---TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCC 61224 | | || | |||| | ||||||| | || ||||| |||||||| Sbjct 173800 AATAACAGAATGAATGAAAATGAAAGATTTTTCATTTCAAGAGTCTTGGCTTTCTTTGCT 173741 Query 61225 GCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTG 61284 ||||| || ||||| |||||||| || || | ||| |||| | || || ||| | Sbjct 173740 GCTTCTGATGGTATTGTCAATGAAAACTTGGTTGAAAATTTCTCTGCTGAAGTTCAAATT 173681 Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344 | || || ||||||||||| ||||| ||| ||||| || | ||||| || | Sbjct 173680 CCAGAAGCTAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCTGAAACT 173621 Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404 || | | | | || || ||||||| ||| | |||| ||| || || || Sbjct 173620 TATTCTTTATTATTAGACACATACATCAAGGATCCAAAGGAAAATGATTTCTTATTAAAC 173561 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGAT-CAC 61463 || || || || || || | | ||| || || || ||||| | | ||||| || Sbjct 173560 GCTATAGAAACTATTCCTGAAATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAA 173501 Query 61464 CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 | | ||| || |||| |||| || || | || ||||| | || || ||||| || Sbjct 173500 GATAAGGACG-CTTTGTTTGCTGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTT 173442 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 |||| ||| || ||||| || ||||| |||||||||||| || | ||||| ||| | Sbjct 173441 TTTCTCTGGTTCATTTGCTGCTATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTT 173382 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 ||| ||| ||| || ||||| | | || || || | ||| ||| ||||| Sbjct 173381 GACTTTCTCCAACGAATTGATCTGTAGAGATGAAGGTTTACATACTGACTTTGC 173328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567801340240