Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq11 352 5e-95
seq9 351 2e-94
>seq11
Length=9596
Score = 352 bits (390), Expect = 5e-95
Identities = 234/257 (91%), Gaps = 2/257 (1%)
Strand=Plus/Plus
Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATA 121
|| |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 1670 GATCCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 1729
Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1730 TATTAGCATGGAATAATAGAATAGGACGATTGGTTCTATTTTGTTGGTTTCTAGGACCAT 1789
Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||
Sbjct 1790 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 1849
Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301
|||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||
Sbjct 1850 TGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGTCAAGGACGTTTTCATTAATCA- 1908
Query 302 TGAACGAAAGTTAGGGG 318
||||||||||||||||
Sbjct 1909 AGAACGAAAGTTAGGGG 1925
Score = 129 bits (142), Expect = 1e-27
Identities = 82/88 (93%), Gaps = 1/88 (1%)
Strand=Plus/Plus
Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC-CTTTGCTCGAATA 121
|| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 9508 GATCCAGGCTTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 9567
Query 122 CATTAGCATGGAATAATAGAATAGGACG 149
|||||||||||||||||||||||||||
Sbjct 9568 TATTAGCATGGAATAATAGAATAGGACG 9595
>seq9
Length=3620
Score = 351 bits (388), Expect = 2e-94
Identities = 233/257 (91%), Gaps = 2/257 (1%)
Strand=Plus/Minus
Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATA 121
|| ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 535 GATCCAGGMTTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 476
Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 475 TATTAGCATGGAATAATAGAATAGGACGATTGGTTCTATTTTGTTGGTTTCTAGGACCAT 416
Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241
|||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||
Sbjct 415 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 356
Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301
|||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||
Sbjct 355 TGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGTCAAGGACGTTTTCATTAATCA- 297
Query 302 TGAACGAAAGTTAGGGG 318
||||||||||||||||
Sbjct 296 AGAACGAAAGTTAGGGG 280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915199835264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |