Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq11 352 5e-95 seq9 351 2e-94 >seq11 Length=9596 Score = 352 bits (390), Expect = 5e-95 Identities = 234/257 (91%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATA 121 || |||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 1670 GATCCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 1729 Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1730 TATTAGCATGGAATAATAGAATAGGACGATTGGTTCTATTTTGTTGGTTTCTAGGACCAT 1789 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| Sbjct 1790 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 1849 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||||||| ||||||||||||||||||||||| || |||||| |||||||||||||| Sbjct 1850 TGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGTCAAGGACGTTTTCATTAATCA- 1908 Query 302 TGAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 1909 AGAACGAAAGTTAGGGG 1925 Score = 129 bits (142), Expect = 1e-27 Identities = 82/88 (93%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC-CTTTGCTCGAATA 121 || ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 9508 GATCCAGGCTTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 9567 Query 122 CATTAGCATGGAATAATAGAATAGGACG 149 ||||||||||||||||||||||||||| Sbjct 9568 TATTAGCATGGAATAATAGAATAGGACG 9595 >seq9 Length=3620 Score = 351 bits (388), Expect = 2e-94 Identities = 233/257 (91%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATA 121 || ||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 535 GATCCAGGMTTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 476 Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 475 TATTAGCATGGAATAATAGAATAGGACGATTGGTTCTATTTTGTTGGTTTCTAGGACCAT 416 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| Sbjct 415 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCT 356 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||||||| ||||||||||||||||||||||| || |||||| |||||||||||||| Sbjct 355 TGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGTCAAGGACGTTTTCATTAATCA- 297 Query 302 TGAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 296 AGAACGAAAGTTAGGGG 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199835264