Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq11 628 1e-177 >seq11 Length=9596 Score = 628 bits (696), Expect = 1e-177 Identities = 541/658 (82%), Gaps = 16/658 (2%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||||| ||||||||||||||||||||||||||| || |||| |||||||| | ||||||| Sbjct 3651 TTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAAG 3710 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||| Sbjct 3711 CTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGAAAAGAACT 3770 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| ||||||||||||||||||||||| || | | ||||| Sbjct 3771 TTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCATTTGATCAGACA 3830 Query 214 TGCCCGCAGTTGC-TCAACCGGCCCCTCG---GCCGGTGCACTCTTCTGCGGT-CA---G 265 || |||| | || ||| |||| || | || |||| | || | Sbjct 3831 TGGTGTTTTTTGCATGCACTCGCCTCTCGTGGGCTTGGGC-CTCTCAAAAATTTCACTGG 3889 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325 |||| ||||| || ||| | ||||||| | |||||| || | ||||| | | Sbjct 3890 GCCAACATCAATTCTGGCAGCAGGATAAAT-CATTAAGAATGTAGCTAC-TTCGGTAG-T 3946 Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATG 385 |||||||| |||||| | | ||| ||| ||||| | ||||| |||| |||||| Sbjct 3947 GTTATAGCTTTT--TGGAATACTGTTAGCCGGGATTGAGGACTGCGCTTCGGCAAGGATG 4004 Query 386 CTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 |||| |||||||| | || |||||||||| |||||||||||||||||||||| ||||| Sbjct 4005 TTGGCATAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTCTAT 4064 Query 446 GCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGT 505 |||||||||||||||| |||||||| ||||||||||||||||||| |||| || || | Sbjct 4065 GCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTTGGGGCC--T 4122 Query 506 GAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTG 565 |||||||| ||||||||| | |||||| ||||||| | |||||||||||||||||||| Sbjct 4123 TCGGGTGCACAATCGACCGACCTTGATGTTTTCGGATAGGTTTGAGTAAGAGCATAGCTG 4182 Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4183 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 4242 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 4243 GGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 4300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999613900